Gene : Eucgr.K02101 E. grandis v2.0
Defline:  (1 of 8) PTHR23130:SF95 - AUXIN-RESPONSIVE PROTEIN-RELATED Genomic Order:  1754
Name:  ? Eucgr.K02101 Secondary Identifier:  ? PAC:32066390
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02101 0.5kb upstream 0.5kb upstream 1750 true Chr11: 28678878-28680627 Eucalyptus grandis
Eucgr.K02101 0.5kb upstream 0.5kb upstream 500 false Chr11: 28680128-28680627 Eucalyptus grandis
Eucgr.K02101 0.5kb downstream 0.5kb downstream 1750 true Chr11: 28678378-28680127 Eucalyptus grandis
Eucgr.K02101 0.5kb downstream 0.5kb downstream 500 false Chr11: 28678378-28678877 Eucalyptus grandis
Eucgr.K02101 1.0kb upstream 1.0kb upstream 2250 true Chr11: 28678878-28681127 Eucalyptus grandis
Eucgr.K02101 1.0kb upstream 1.0kb upstream 1000 false Chr11: 28680128-28681127 Eucalyptus grandis
Eucgr.K02101 1.0kb downstream 1.0kb downstream 2250 true Chr11: 28677878-28680127 Eucalyptus grandis
Eucgr.K02101 1.0kb downstream 1.0kb downstream 1000 false Chr11: 28677878-28678877 Eucalyptus grandis
Eucgr.K02101 2.0kb upstream 2.0kb upstream 3250 true Chr11: 28678878-28682127 Eucalyptus grandis
Eucgr.K02101 2.0kb upstream 2.0kb upstream 2000 false Chr11: 28680128-28682127 Eucalyptus grandis
Eucgr.K02101 2.0kb downstream 2.0kb downstream 3250 true Chr11: 28676878-28680127 Eucalyptus grandis
Eucgr.K02101 2.0kb downstream 2.0kb downstream 2000 false Chr11: 28676878-28678877 Eucalyptus grandis
Eucgr.K02101 5.0kb upstream 5.0kb upstream 6250 true Chr11: 28678878-28685127 Eucalyptus grandis
Eucgr.K02101 5.0kb upstream 5.0kb upstream 5000 false Chr11: 28680128-28685127 Eucalyptus grandis
Eucgr.K02101 5.0kb downstream 5.0kb downstream 6250 true Chr11: 28673878-28680127 Eucalyptus grandis
Eucgr.K02101 5.0kb downstream 5.0kb downstream 5000 false Chr11: 28673878-28678877 Eucalyptus grandis
Eucgr.K02101 10.0kb upstream 10.0kb upstream 11250 true Chr11: 28678878-28690127 Eucalyptus grandis
Eucgr.K02101 10.0kb upstream 10.0kb upstream 10000 false Chr11: 28680128-28690127 Eucalyptus grandis
Eucgr.K02101 10.0kb downstream 10.0kb downstream 11250 true Chr11: 28668878-28680127 Eucalyptus grandis
Eucgr.K02101 10.0kb downstream 10.0kb downstream 10000 false Chr11: 28668878-28678877 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071203 5270 Rosid View MSA
123745343 5271 Pentapetalae View MSA
122771463 5272 Eudicot View MSA
122050143 5273 Angiosperm View MSA
121311761 5274 Embryophyte View MSA
123349016 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 74.6855 0.0 165.968 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 46.0663 0.0 104.869 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 33.4931 0.0 77.6794    

0 Strain