Gene : Eucgr.K02102 E. grandis v2.0
Defline:  (1 of 8) PTHR23130:SF95 - AUXIN-RESPONSIVE PROTEIN-RELATED Genomic Order:  1755
Name:  ? Eucgr.K02102 Secondary Identifier:  ? PAC:32066111
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02102 0.5kb upstream 0.5kb upstream 1559 true Chr11: 28696009-28697567 Eucalyptus grandis
Eucgr.K02102 0.5kb upstream 0.5kb upstream 500 false Chr11: 28697068-28697567 Eucalyptus grandis
Eucgr.K02102 0.5kb downstream 0.5kb downstream 1559 true Chr11: 28695509-28697067 Eucalyptus grandis
Eucgr.K02102 0.5kb downstream 0.5kb downstream 500 false Chr11: 28695509-28696008 Eucalyptus grandis
Eucgr.K02102 1.0kb upstream 1.0kb upstream 2059 true Chr11: 28696009-28698067 Eucalyptus grandis
Eucgr.K02102 1.0kb upstream 1.0kb upstream 1000 false Chr11: 28697068-28698067 Eucalyptus grandis
Eucgr.K02102 1.0kb downstream 1.0kb downstream 2059 true Chr11: 28695009-28697067 Eucalyptus grandis
Eucgr.K02102 1.0kb downstream 1.0kb downstream 1000 false Chr11: 28695009-28696008 Eucalyptus grandis
Eucgr.K02102 2.0kb upstream 2.0kb upstream 3059 true Chr11: 28696009-28699067 Eucalyptus grandis
Eucgr.K02102 2.0kb upstream 2.0kb upstream 2000 false Chr11: 28697068-28699067 Eucalyptus grandis
Eucgr.K02102 2.0kb downstream 2.0kb downstream 3059 true Chr11: 28694009-28697067 Eucalyptus grandis
Eucgr.K02102 2.0kb downstream 2.0kb downstream 2000 false Chr11: 28694009-28696008 Eucalyptus grandis
Eucgr.K02102 5.0kb upstream 5.0kb upstream 6059 true Chr11: 28696009-28702067 Eucalyptus grandis
Eucgr.K02102 5.0kb upstream 5.0kb upstream 5000 false Chr11: 28697068-28702067 Eucalyptus grandis
Eucgr.K02102 5.0kb downstream 5.0kb downstream 6059 true Chr11: 28691009-28697067 Eucalyptus grandis
Eucgr.K02102 5.0kb downstream 5.0kb downstream 5000 false Chr11: 28691009-28696008 Eucalyptus grandis
Eucgr.K02102 10.0kb upstream 10.0kb upstream 11059 true Chr11: 28696009-28707067 Eucalyptus grandis
Eucgr.K02102 10.0kb upstream 10.0kb upstream 10000 false Chr11: 28697068-28707067 Eucalyptus grandis
Eucgr.K02102 10.0kb downstream 10.0kb downstream 11059 true Chr11: 28686009-28697067 Eucalyptus grandis
Eucgr.K02102 10.0kb downstream 10.0kb downstream 10000 false Chr11: 28686009-28696008 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071203 5270 Rosid View MSA
123745343 5271 Pentapetalae View MSA
122771463 5272 Eudicot View MSA
122050143 5273 Angiosperm View MSA
121311761 5274 Embryophyte View MSA
123349016 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.1955 0.0 33.949    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 8.29689 0.0 21.0318    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.12147 0.0 8.71939   Low
cufflinks 15.0123 0.0 35.5562    

0 Strain