Gene : Eucgr.K02066 E. grandis v2.0
Defline:  (1 of 7) PTHR21470 - NTKL-BINDING PROTEIN 1 Genomic Order:  1721
Name:  ? Eucgr.K02066 Secondary Identifier:  ? PAC:32067627
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02066 0.5kb upstream 0.5kb upstream 3150 true Chr11: 27714582-27717731 Eucalyptus grandis
Eucgr.K02066 0.5kb upstream 0.5kb upstream 500 false Chr11: 27714582-27715081 Eucalyptus grandis
Eucgr.K02066 0.5kb downstream 0.5kb downstream 3150 true Chr11: 27715082-27718231 Eucalyptus grandis
Eucgr.K02066 0.5kb downstream 0.5kb downstream 500 false Chr11: 27717732-27718231 Eucalyptus grandis
Eucgr.K02066 1.0kb upstream 1.0kb upstream 3650 true Chr11: 27714082-27717731 Eucalyptus grandis
Eucgr.K02066 1.0kb upstream 1.0kb upstream 1000 false Chr11: 27714082-27715081 Eucalyptus grandis
Eucgr.K02066 1.0kb downstream 1.0kb downstream 3650 true Chr11: 27715082-27718731 Eucalyptus grandis
Eucgr.K02066 1.0kb downstream 1.0kb downstream 1000 false Chr11: 27717732-27718731 Eucalyptus grandis
Eucgr.K02066 2.0kb upstream 2.0kb upstream 4650 true Chr11: 27713082-27717731 Eucalyptus grandis
Eucgr.K02066 2.0kb upstream 2.0kb upstream 2000 false Chr11: 27713082-27715081 Eucalyptus grandis
Eucgr.K02066 2.0kb downstream 2.0kb downstream 4650 true Chr11: 27715082-27719731 Eucalyptus grandis
Eucgr.K02066 2.0kb downstream 2.0kb downstream 2000 false Chr11: 27717732-27719731 Eucalyptus grandis
Eucgr.K02066 5.0kb upstream 5.0kb upstream 7650 true Chr11: 27710082-27717731 Eucalyptus grandis
Eucgr.K02066 5.0kb upstream 5.0kb upstream 5000 false Chr11: 27710082-27715081 Eucalyptus grandis
Eucgr.K02066 5.0kb downstream 5.0kb downstream 7650 true Chr11: 27715082-27722731 Eucalyptus grandis
Eucgr.K02066 5.0kb downstream 5.0kb downstream 5000 false Chr11: 27717732-27722731 Eucalyptus grandis
Eucgr.K02066 10.0kb upstream 10.0kb upstream 12650 true Chr11: 27705082-27717731 Eucalyptus grandis
Eucgr.K02066 10.0kb upstream 10.0kb upstream 10000 false Chr11: 27705082-27715081 Eucalyptus grandis
Eucgr.K02066 10.0kb downstream 10.0kb downstream 12650 true Chr11: 27715082-27727731 Eucalyptus grandis
Eucgr.K02066 10.0kb downstream 10.0kb downstream 10000 false Chr11: 27717732-27727731 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073883 5270 Rosid View MSA
123746647 5271 Pentapetalae View MSA
122796434 5272 Eudicot View MSA
122043123 5273 Angiosperm View MSA
121348137 5274 Embryophyte View MSA
123380740 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.9468 0.0 83.9172 High  
cufflinks 132.416 0.0 307.167 High High
cufflinks 34.2474 0.0 75.756 High  
cufflinks 73.5799 0.0 165.109 High  
cufflinks 120.363 0.0 277.283 High High
cufflinks 21.6997 0.0 48.4112   Low

0 Strain