Gene : Eucgr.K02734 E. grandis v2.0
Defline:  (1 of 1) PTHR13780:SF36 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA-1 Genomic Order:  2249
Name:  ? Eucgr.K02734 Secondary Identifier:  ? PAC:32067550
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02734 0.5kb upstream 0.5kb upstream 4137 true Chr11: 34861712-34865848 Eucalyptus grandis
Eucgr.K02734 0.5kb upstream 0.5kb upstream 500 false Chr11: 34865349-34865848 Eucalyptus grandis
Eucgr.K02734 0.5kb downstream 0.5kb downstream 4137 true Chr11: 34861212-34865348 Eucalyptus grandis
Eucgr.K02734 0.5kb downstream 0.5kb downstream 500 false Chr11: 34861212-34861711 Eucalyptus grandis
Eucgr.K02734 1.0kb upstream 1.0kb upstream 4637 true Chr11: 34861712-34866348 Eucalyptus grandis
Eucgr.K02734 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34865349-34866348 Eucalyptus grandis
Eucgr.K02734 1.0kb downstream 1.0kb downstream 4637 true Chr11: 34860712-34865348 Eucalyptus grandis
Eucgr.K02734 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34860712-34861711 Eucalyptus grandis
Eucgr.K02734 2.0kb upstream 2.0kb upstream 5637 true Chr11: 34861712-34867348 Eucalyptus grandis
Eucgr.K02734 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34865349-34867348 Eucalyptus grandis
Eucgr.K02734 2.0kb downstream 2.0kb downstream 5637 true Chr11: 34859712-34865348 Eucalyptus grandis
Eucgr.K02734 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34859712-34861711 Eucalyptus grandis
Eucgr.K02734 5.0kb upstream 5.0kb upstream 8637 true Chr11: 34861712-34870348 Eucalyptus grandis
Eucgr.K02734 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34865349-34870348 Eucalyptus grandis
Eucgr.K02734 5.0kb downstream 5.0kb downstream 8637 true Chr11: 34856712-34865348 Eucalyptus grandis
Eucgr.K02734 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34856712-34861711 Eucalyptus grandis
Eucgr.K02734 10.0kb upstream 10.0kb upstream 13637 true Chr11: 34861712-34875348 Eucalyptus grandis
Eucgr.K02734 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34865349-34875348 Eucalyptus grandis
Eucgr.K02734 10.0kb downstream 10.0kb downstream 13637 true Chr11: 34851712-34865348 Eucalyptus grandis
Eucgr.K02734 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34851712-34861711 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068322 5270 Rosid View MSA
123743835 5271 Pentapetalae View MSA
122791351 5272 Eudicot View MSA
122045346 5273 Angiosperm View MSA
121348243 5274 Embryophyte View MSA
123427907 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.5355 0.0 94.202 High High
cufflinks 32.8658 0.0 72.6804    
cufflinks 19.3996 0.0 43.2994    
cufflinks 9.75605 0.0 22.6067   Low
cufflinks 25.8249 0.0 57.2089    
cufflinks 30.1196 0.0 66.6538    

0 Strain