Gene : Eucgr.K02724 E. grandis v2.0
Defline:  (1 of 1) PF14968 - Coiled coil protein 84 (CCDC84) Genomic Order:  2239
Name:  ? Eucgr.K02724 Secondary Identifier:  ? PAC:32066757
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02724 0.5kb upstream 0.5kb upstream 4658 true Chr11: 34789150-34793807 Eucalyptus grandis
Eucgr.K02724 0.5kb upstream 0.5kb upstream 500 false Chr11: 34793308-34793807 Eucalyptus grandis
Eucgr.K02724 0.5kb downstream 0.5kb downstream 4658 true Chr11: 34788650-34793307 Eucalyptus grandis
Eucgr.K02724 0.5kb downstream 0.5kb downstream 500 false Chr11: 34788650-34789149 Eucalyptus grandis
Eucgr.K02724 1.0kb upstream 1.0kb upstream 5158 true Chr11: 34789150-34794307 Eucalyptus grandis
Eucgr.K02724 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34793308-34794307 Eucalyptus grandis
Eucgr.K02724 1.0kb downstream 1.0kb downstream 5158 true Chr11: 34788150-34793307 Eucalyptus grandis
Eucgr.K02724 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34788150-34789149 Eucalyptus grandis
Eucgr.K02724 2.0kb upstream 2.0kb upstream 6158 true Chr11: 34789150-34795307 Eucalyptus grandis
Eucgr.K02724 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34793308-34795307 Eucalyptus grandis
Eucgr.K02724 2.0kb downstream 2.0kb downstream 6158 true Chr11: 34787150-34793307 Eucalyptus grandis
Eucgr.K02724 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34787150-34789149 Eucalyptus grandis
Eucgr.K02724 5.0kb upstream 5.0kb upstream 9158 true Chr11: 34789150-34798307 Eucalyptus grandis
Eucgr.K02724 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34793308-34798307 Eucalyptus grandis
Eucgr.K02724 5.0kb downstream 5.0kb downstream 9158 true Chr11: 34784150-34793307 Eucalyptus grandis
Eucgr.K02724 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34784150-34789149 Eucalyptus grandis
Eucgr.K02724 10.0kb upstream 10.0kb upstream 14158 true Chr11: 34789150-34803307 Eucalyptus grandis
Eucgr.K02724 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34793308-34803307 Eucalyptus grandis
Eucgr.K02724 10.0kb downstream 10.0kb downstream 14158 true Chr11: 34779150-34793307 Eucalyptus grandis
Eucgr.K02724 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34779150-34789149 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062307 5270 Rosid View MSA
123738908 5271 Pentapetalae View MSA
122785764 5272 Eudicot View MSA
122044332 5273 Angiosperm View MSA
121347668 5274 Embryophyte View MSA
123380595 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.31536 0.0 15.2975    
cufflinks 7.57052 0.0 17.7824    
cufflinks 6.24286 0.0 17.1071    
cufflinks 7.27876 0.0 19.1211    
cufflinks 9.37708 0.0 21.7944   High
cufflinks 5.85404 0.0 14.6839   Low

0 Strain