Gene : Eucgr.K02659 E. grandis v2.0
Defline:  (1 of 5) PTHR24078:SF261 - DNAJ (HSP40) HOMOLOG, SUBFAMILY A, MEMBER 3A Genomic Order:  2185
Name:  ? Eucgr.K02659 Secondary Identifier:  ? PAC:32067591
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02659 0.5kb upstream 0.5kb upstream 2677 true Chr11: 33868342-33871018 Eucalyptus grandis
Eucgr.K02659 0.5kb upstream 0.5kb upstream 500 false Chr11: 33868342-33868841 Eucalyptus grandis
Eucgr.K02659 0.5kb downstream 0.5kb downstream 2677 true Chr11: 33868842-33871518 Eucalyptus grandis
Eucgr.K02659 0.5kb downstream 0.5kb downstream 500 false Chr11: 33871019-33871518 Eucalyptus grandis
Eucgr.K02659 1.0kb upstream 1.0kb upstream 3177 true Chr11: 33867842-33871018 Eucalyptus grandis
Eucgr.K02659 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33867842-33868841 Eucalyptus grandis
Eucgr.K02659 1.0kb downstream 1.0kb downstream 3177 true Chr11: 33868842-33872018 Eucalyptus grandis
Eucgr.K02659 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33871019-33872018 Eucalyptus grandis
Eucgr.K02659 2.0kb upstream 2.0kb upstream 4177 true Chr11: 33866842-33871018 Eucalyptus grandis
Eucgr.K02659 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33866842-33868841 Eucalyptus grandis
Eucgr.K02659 2.0kb downstream 2.0kb downstream 4177 true Chr11: 33868842-33873018 Eucalyptus grandis
Eucgr.K02659 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33871019-33873018 Eucalyptus grandis
Eucgr.K02659 5.0kb upstream 5.0kb upstream 7177 true Chr11: 33863842-33871018 Eucalyptus grandis
Eucgr.K02659 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33863842-33868841 Eucalyptus grandis
Eucgr.K02659 5.0kb downstream 5.0kb downstream 7177 true Chr11: 33868842-33876018 Eucalyptus grandis
Eucgr.K02659 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33871019-33876018 Eucalyptus grandis
Eucgr.K02659 10.0kb upstream 10.0kb upstream 12177 true Chr11: 33858842-33871018 Eucalyptus grandis
Eucgr.K02659 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33858842-33868841 Eucalyptus grandis
Eucgr.K02659 10.0kb downstream 10.0kb downstream 12177 true Chr11: 33868842-33881018 Eucalyptus grandis
Eucgr.K02659 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33871019-33881018 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068316 5270 Rosid View MSA
123750752 5271 Pentapetalae View MSA
122788591 5272 Eudicot View MSA
122045009 5273 Angiosperm View MSA
121349410 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.09833 0.0 5.69319    
cufflinks 2.72129 0.0 7.19067    
cufflinks 0.835079 0.0 2.50672   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.28409 0.0 6.13866    

0 Strain