Gene : Eucgr.K02649 E. grandis v2.0
Defline:  (1 of 1) PTHR15835:SF2 - NUCLEAR-INTERACTING PARTNER OF ALK Genomic Order:  2175
Name:  ? Eucgr.K02649 Secondary Identifier:  ? PAC:32069278
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02649 0.5kb upstream 0.5kb upstream 7642 true Chr11: 33761649-33769290 Eucalyptus grandis
Eucgr.K02649 0.5kb upstream 0.5kb upstream 500 false Chr11: 33761649-33762148 Eucalyptus grandis
Eucgr.K02649 0.5kb downstream 0.5kb downstream 7642 true Chr11: 33762149-33769790 Eucalyptus grandis
Eucgr.K02649 0.5kb downstream 0.5kb downstream 500 false Chr11: 33769291-33769790 Eucalyptus grandis
Eucgr.K02649 1.0kb upstream 1.0kb upstream 8142 true Chr11: 33761149-33769290 Eucalyptus grandis
Eucgr.K02649 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33761149-33762148 Eucalyptus grandis
Eucgr.K02649 1.0kb downstream 1.0kb downstream 8142 true Chr11: 33762149-33770290 Eucalyptus grandis
Eucgr.K02649 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33769291-33770290 Eucalyptus grandis
Eucgr.K02649 2.0kb upstream 2.0kb upstream 9142 true Chr11: 33760149-33769290 Eucalyptus grandis
Eucgr.K02649 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33760149-33762148 Eucalyptus grandis
Eucgr.K02649 2.0kb downstream 2.0kb downstream 9142 true Chr11: 33762149-33771290 Eucalyptus grandis
Eucgr.K02649 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33769291-33771290 Eucalyptus grandis
Eucgr.K02649 5.0kb upstream 5.0kb upstream 12142 true Chr11: 33757149-33769290 Eucalyptus grandis
Eucgr.K02649 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33757149-33762148 Eucalyptus grandis
Eucgr.K02649 5.0kb downstream 5.0kb downstream 12142 true Chr11: 33762149-33774290 Eucalyptus grandis
Eucgr.K02649 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33769291-33774290 Eucalyptus grandis
Eucgr.K02649 10.0kb upstream 10.0kb upstream 17142 true Chr11: 33752149-33769290 Eucalyptus grandis
Eucgr.K02649 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33752149-33762148 Eucalyptus grandis
Eucgr.K02649 10.0kb downstream 10.0kb downstream 17142 true Chr11: 33762149-33779290 Eucalyptus grandis
Eucgr.K02649 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33769291-33779290 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062210 5270 Rosid View MSA
123740172 5271 Pentapetalae View MSA
122787275 5272 Eudicot View MSA
122048012 5273 Angiosperm View MSA
121349794 5274 Embryophyte View MSA
123428489 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.63802 0.0 14.474    
cufflinks 13.1774 0.0 30.1685    
cufflinks 6.60812 0.0 15.8024    
cufflinks 12.6206 0.0 28.6395    
cufflinks 12.0783 0.0 28.0512    
cufflinks 5.1839 0.0 14.4365   Low

0 Strain