Gene : Eucgr.K02596 E. grandis v2.0
Defline:  (1 of 2) PTHR11014:SF108 - IAA-AMINO ACID HYDROLASE ILR1 Genomic Order:  1648
Name:  ? Eucgr.K02596 Secondary Identifier:  ? PAC:32066936
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02596 0.5kb upstream 0.5kb upstream 3156 true Chr11: 26127981-26131136 Eucalyptus grandis
Eucgr.K02596 0.5kb upstream 0.5kb upstream 500 false Chr11: 26127981-26128480 Eucalyptus grandis
Eucgr.K02596 0.5kb downstream 0.5kb downstream 3156 true Chr11: 26128481-26131636 Eucalyptus grandis
Eucgr.K02596 0.5kb downstream 0.5kb downstream 500 false Chr11: 26131137-26131636 Eucalyptus grandis
Eucgr.K02596 1.0kb upstream 1.0kb upstream 3656 true Chr11: 26127481-26131136 Eucalyptus grandis
Eucgr.K02596 1.0kb upstream 1.0kb upstream 1000 false Chr11: 26127481-26128480 Eucalyptus grandis
Eucgr.K02596 1.0kb downstream 1.0kb downstream 3656 true Chr11: 26128481-26132136 Eucalyptus grandis
Eucgr.K02596 1.0kb downstream 1.0kb downstream 1000 false Chr11: 26131137-26132136 Eucalyptus grandis
Eucgr.K02596 2.0kb upstream 2.0kb upstream 4656 true Chr11: 26126481-26131136 Eucalyptus grandis
Eucgr.K02596 2.0kb upstream 2.0kb upstream 2000 false Chr11: 26126481-26128480 Eucalyptus grandis
Eucgr.K02596 2.0kb downstream 2.0kb downstream 4656 true Chr11: 26128481-26133136 Eucalyptus grandis
Eucgr.K02596 2.0kb downstream 2.0kb downstream 2000 false Chr11: 26131137-26133136 Eucalyptus grandis
Eucgr.K02596 5.0kb upstream 5.0kb upstream 7656 true Chr11: 26123481-26131136 Eucalyptus grandis
Eucgr.K02596 5.0kb upstream 5.0kb upstream 5000 false Chr11: 26123481-26128480 Eucalyptus grandis
Eucgr.K02596 5.0kb downstream 5.0kb downstream 7656 true Chr11: 26128481-26136136 Eucalyptus grandis
Eucgr.K02596 5.0kb downstream 5.0kb downstream 5000 false Chr11: 26131137-26136136 Eucalyptus grandis
Eucgr.K02596 10.0kb upstream 10.0kb upstream 12656 true Chr11: 26118481-26131136 Eucalyptus grandis
Eucgr.K02596 10.0kb upstream 10.0kb upstream 10000 false Chr11: 26118481-26128480 Eucalyptus grandis
Eucgr.K02596 10.0kb downstream 10.0kb downstream 12656 true Chr11: 26128481-26141136 Eucalyptus grandis
Eucgr.K02596 10.0kb downstream 10.0kb downstream 10000 false Chr11: 26131137-26141136 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072861 5270 Rosid View MSA
123748311 5271 Pentapetalae View MSA
122791889 5272 Eudicot View MSA
122046884 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.52318 0.0 11.2435    
cufflinks 2.08029 0.0 5.59533   Low
cufflinks 6.0359 0.0 14.5757   High
cufflinks 2.35077 0.0 6.22563   Low
cufflinks 3.95256 0.0 9.96998    
cufflinks 4.96691 0.0 12.236    

0 Strain