Gene : Eucgr.K02550 E. grandis v2.0
Defline:  (1 of 1) PTHR35502:SF2 - MOVEMENT PROTEIN BINDING PROTEIN 2C Genomic Order:  2150
Name:  ? Eucgr.K02550 Secondary Identifier:  ? PAC:32067873
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02550 0.5kb upstream 0.5kb upstream 3772 true Chr11: 33388448-33392219 Eucalyptus grandis
Eucgr.K02550 0.5kb upstream 0.5kb upstream 500 false Chr11: 33391720-33392219 Eucalyptus grandis
Eucgr.K02550 0.5kb downstream 0.5kb downstream 3772 true Chr11: 33387948-33391719 Eucalyptus grandis
Eucgr.K02550 0.5kb downstream 0.5kb downstream 500 false Chr11: 33387948-33388447 Eucalyptus grandis
Eucgr.K02550 1.0kb upstream 1.0kb upstream 4272 true Chr11: 33388448-33392719 Eucalyptus grandis
Eucgr.K02550 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33391720-33392719 Eucalyptus grandis
Eucgr.K02550 1.0kb downstream 1.0kb downstream 4272 true Chr11: 33387448-33391719 Eucalyptus grandis
Eucgr.K02550 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33387448-33388447 Eucalyptus grandis
Eucgr.K02550 2.0kb upstream 2.0kb upstream 5272 true Chr11: 33388448-33393719 Eucalyptus grandis
Eucgr.K02550 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33391720-33393719 Eucalyptus grandis
Eucgr.K02550 2.0kb downstream 2.0kb downstream 5272 true Chr11: 33386448-33391719 Eucalyptus grandis
Eucgr.K02550 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33386448-33388447 Eucalyptus grandis
Eucgr.K02550 5.0kb upstream 5.0kb upstream 8272 true Chr11: 33388448-33396719 Eucalyptus grandis
Eucgr.K02550 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33391720-33396719 Eucalyptus grandis
Eucgr.K02550 5.0kb downstream 5.0kb downstream 8272 true Chr11: 33383448-33391719 Eucalyptus grandis
Eucgr.K02550 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33383448-33388447 Eucalyptus grandis
Eucgr.K02550 10.0kb upstream 10.0kb upstream 13272 true Chr11: 33388448-33401719 Eucalyptus grandis
Eucgr.K02550 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33391720-33401719 Eucalyptus grandis
Eucgr.K02550 10.0kb downstream 10.0kb downstream 13272 true Chr11: 33378448-33391719 Eucalyptus grandis
Eucgr.K02550 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33378448-33388447 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040997 5273 Angiosperm View MSA
124064916 5270 Rosid View MSA
123736835 5271 Pentapetalae View MSA
122796308 5272 Eudicot View MSA
121350543 5274 Embryophyte View MSA
123381783 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.97557 0.0 23.7691    
cufflinks 20.2446 0.0 45.5409   High
cufflinks 7.10318 0.0 17.4167   Low
cufflinks 15.9091 0.0 36.2715    
cufflinks 8.59754 0.0 20.7208    
cufflinks 10.5856 0.0 25.348    

0 Strain