Gene : Eucgr.K02531 E. grandis v2.0
Defline:  (1 of 1) PTHR10000//PTHR10000:SF13 - PHOSPHOSERINE PHOSPHATASE Genomic Order:  2132
Name:  ? Eucgr.K02531 Secondary Identifier:  ? PAC:32066502
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis SER-GLYSYN-PWY Eucalyptus grandis pathologic  
Egrandis SERSYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02531 0.5kb upstream 0.5kb upstream 4117 true Chr11: 33216374-33220490 Eucalyptus grandis
Eucgr.K02531 0.5kb upstream 0.5kb upstream 500 false Chr11: 33216374-33216873 Eucalyptus grandis
Eucgr.K02531 0.5kb downstream 0.5kb downstream 4117 true Chr11: 33216874-33220990 Eucalyptus grandis
Eucgr.K02531 0.5kb downstream 0.5kb downstream 500 false Chr11: 33220491-33220990 Eucalyptus grandis
Eucgr.K02531 1.0kb upstream 1.0kb upstream 4617 true Chr11: 33215874-33220490 Eucalyptus grandis
Eucgr.K02531 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33215874-33216873 Eucalyptus grandis
Eucgr.K02531 1.0kb downstream 1.0kb downstream 4617 true Chr11: 33216874-33221490 Eucalyptus grandis
Eucgr.K02531 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33220491-33221490 Eucalyptus grandis
Eucgr.K02531 2.0kb upstream 2.0kb upstream 5617 true Chr11: 33214874-33220490 Eucalyptus grandis
Eucgr.K02531 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33214874-33216873 Eucalyptus grandis
Eucgr.K02531 2.0kb downstream 2.0kb downstream 5617 true Chr11: 33216874-33222490 Eucalyptus grandis
Eucgr.K02531 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33220491-33222490 Eucalyptus grandis
Eucgr.K02531 5.0kb upstream 5.0kb upstream 8617 true Chr11: 33211874-33220490 Eucalyptus grandis
Eucgr.K02531 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33211874-33216873 Eucalyptus grandis
Eucgr.K02531 5.0kb downstream 5.0kb downstream 8617 true Chr11: 33216874-33225490 Eucalyptus grandis
Eucgr.K02531 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33220491-33225490 Eucalyptus grandis
Eucgr.K02531 10.0kb upstream 10.0kb upstream 13617 true Chr11: 33206874-33220490 Eucalyptus grandis
Eucgr.K02531 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33206874-33216873 Eucalyptus grandis
Eucgr.K02531 10.0kb downstream 10.0kb downstream 13617 true Chr11: 33216874-33230490 Eucalyptus grandis
Eucgr.K02531 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33220491-33230490 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065988 5270 Rosid View MSA
123738315 5271 Pentapetalae View MSA
122789675 5272 Eudicot View MSA
122041828 5273 Angiosperm View MSA
121346713 5274 Embryophyte View MSA
123426809 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.8548 0.0 62.5982    
cufflinks 77.3364 0.0 182.096 High High
cufflinks 16.9773 0.0 45.7112    
cufflinks 78.6402 0.0 186.224 High High
cufflinks 16.2041 0.0 38.6625    
cufflinks 29.0027 0.0 65.3559    

0 Strain