Gene : Eucgr.K02499 E. grandis v2.0
Defline:  (1 of 4) PTHR19305 - SYNAPTOSOMAL ASSOCIATED PROTEIN Genomic Order:  2105
Name:  ? Eucgr.K02499 Secondary Identifier:  ? PAC:32065951
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02499 0.5kb upstream 0.5kb upstream 3761 true Chr11: 32916287-32920047 Eucalyptus grandis
Eucgr.K02499 0.5kb upstream 0.5kb upstream 500 false Chr11: 32919548-32920047 Eucalyptus grandis
Eucgr.K02499 0.5kb downstream 0.5kb downstream 3761 true Chr11: 32915787-32919547 Eucalyptus grandis
Eucgr.K02499 0.5kb downstream 0.5kb downstream 500 false Chr11: 32915787-32916286 Eucalyptus grandis
Eucgr.K02499 1.0kb upstream 1.0kb upstream 4261 true Chr11: 32916287-32920547 Eucalyptus grandis
Eucgr.K02499 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32919548-32920547 Eucalyptus grandis
Eucgr.K02499 1.0kb downstream 1.0kb downstream 4261 true Chr11: 32915287-32919547 Eucalyptus grandis
Eucgr.K02499 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32915287-32916286 Eucalyptus grandis
Eucgr.K02499 2.0kb upstream 2.0kb upstream 5261 true Chr11: 32916287-32921547 Eucalyptus grandis
Eucgr.K02499 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32919548-32921547 Eucalyptus grandis
Eucgr.K02499 2.0kb downstream 2.0kb downstream 5261 true Chr11: 32914287-32919547 Eucalyptus grandis
Eucgr.K02499 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32914287-32916286 Eucalyptus grandis
Eucgr.K02499 5.0kb upstream 5.0kb upstream 8261 true Chr11: 32916287-32924547 Eucalyptus grandis
Eucgr.K02499 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32919548-32924547 Eucalyptus grandis
Eucgr.K02499 5.0kb downstream 5.0kb downstream 8261 true Chr11: 32911287-32919547 Eucalyptus grandis
Eucgr.K02499 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32911287-32916286 Eucalyptus grandis
Eucgr.K02499 10.0kb upstream 10.0kb upstream 13261 true Chr11: 32916287-32929547 Eucalyptus grandis
Eucgr.K02499 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32919548-32929547 Eucalyptus grandis
Eucgr.K02499 10.0kb downstream 10.0kb downstream 13261 true Chr11: 32906287-32919547 Eucalyptus grandis
Eucgr.K02499 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32906287-32916286 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069233 5270 Rosid View MSA
123745951 5271 Pentapetalae View MSA
122796965 5272 Eudicot View MSA
122050570 5273 Angiosperm View MSA
121349451 5274 Embryophyte View MSA
123428314 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.0808 0.0 177.158 High  
cufflinks 46.0887 0.0 112.879 High  
cufflinks 57.4872 0.0 164.908 High  
cufflinks 109.942 0.0 318.438 High High
cufflinks 100.171 0.0 267.059 High High
cufflinks 34.2716 0.0 77.015 High Low

0 Strain