Gene : Eucgr.K02497 E. grandis v2.0
Defline:  (1 of 1) PTHR14363:SF17 - HEPARANASE-LIKE PROTEIN 1-RELATED Genomic Order:  2103
Name:  ? Eucgr.K02497 Secondary Identifier:  ? PAC:32069686
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7213 Eucalyptus grandis pathologic  
Egrandis PWY-7214 Eucalyptus grandis pathologic  
Egrandis PWY-7445 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02497 0.5kb upstream 0.5kb upstream 5054 true Chr11: 32911208-32916261 Eucalyptus grandis
Eucgr.K02497 0.5kb upstream 0.5kb upstream 500 false Chr11: 32911208-32911707 Eucalyptus grandis
Eucgr.K02497 0.5kb downstream 0.5kb downstream 5054 true Chr11: 32911708-32916761 Eucalyptus grandis
Eucgr.K02497 0.5kb downstream 0.5kb downstream 500 false Chr11: 32916262-32916761 Eucalyptus grandis
Eucgr.K02497 1.0kb upstream 1.0kb upstream 5554 true Chr11: 32910708-32916261 Eucalyptus grandis
Eucgr.K02497 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32910708-32911707 Eucalyptus grandis
Eucgr.K02497 1.0kb downstream 1.0kb downstream 5554 true Chr11: 32911708-32917261 Eucalyptus grandis
Eucgr.K02497 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32916262-32917261 Eucalyptus grandis
Eucgr.K02497 2.0kb upstream 2.0kb upstream 6554 true Chr11: 32909708-32916261 Eucalyptus grandis
Eucgr.K02497 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32909708-32911707 Eucalyptus grandis
Eucgr.K02497 2.0kb downstream 2.0kb downstream 6554 true Chr11: 32911708-32918261 Eucalyptus grandis
Eucgr.K02497 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32916262-32918261 Eucalyptus grandis
Eucgr.K02497 5.0kb upstream 5.0kb upstream 9554 true Chr11: 32906708-32916261 Eucalyptus grandis
Eucgr.K02497 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32906708-32911707 Eucalyptus grandis
Eucgr.K02497 5.0kb downstream 5.0kb downstream 9554 true Chr11: 32911708-32921261 Eucalyptus grandis
Eucgr.K02497 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32916262-32921261 Eucalyptus grandis
Eucgr.K02497 10.0kb upstream 10.0kb upstream 14554 true Chr11: 32901708-32916261 Eucalyptus grandis
Eucgr.K02497 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32901708-32911707 Eucalyptus grandis
Eucgr.K02497 10.0kb downstream 10.0kb downstream 14554 true Chr11: 32911708-32926261 Eucalyptus grandis
Eucgr.K02497 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32916262-32926261 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070666 5270 Rosid View MSA
123745187 5271 Pentapetalae View MSA
122795641 5272 Eudicot View MSA
122049598 5273 Angiosperm View MSA
121348264 5274 Embryophyte View MSA
123380798 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.45693 0.0 15.2512   Low
cufflinks 26.5171 0.0 60.6911    
cufflinks 12.0474 0.0 27.4644    
cufflinks 30.6796 0.0 71.268    
cufflinks 45.1744 0.0 104.452 High High
cufflinks 13.5298 0.0 30.5519    

0 Strain