Gene : Eucgr.K02441 E. grandis v2.0
Defline:  (1 of 1) PTHR10257:SF20 - SERINE/THREONINE PROTEIN PHOSPHATASE 2A 57 KDA REGULATORY SUBUNIT B' ALPHA ISOFORM-RELATED Genomic Order:  2052
Name:  ? Eucgr.K02441 Secondary Identifier:  ? PAC:32069536
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02441 0.5kb upstream 0.5kb upstream 7119 true Chr11: 32452539-32459657 Eucalyptus grandis
Eucgr.K02441 0.5kb upstream 0.5kb upstream 500 false Chr11: 32459158-32459657 Eucalyptus grandis
Eucgr.K02441 0.5kb downstream 0.5kb downstream 7119 true Chr11: 32452039-32459157 Eucalyptus grandis
Eucgr.K02441 0.5kb downstream 0.5kb downstream 500 false Chr11: 32452039-32452538 Eucalyptus grandis
Eucgr.K02441 1.0kb upstream 1.0kb upstream 7619 true Chr11: 32452539-32460157 Eucalyptus grandis
Eucgr.K02441 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32459158-32460157 Eucalyptus grandis
Eucgr.K02441 1.0kb downstream 1.0kb downstream 7619 true Chr11: 32451539-32459157 Eucalyptus grandis
Eucgr.K02441 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32451539-32452538 Eucalyptus grandis
Eucgr.K02441 2.0kb upstream 2.0kb upstream 8619 true Chr11: 32452539-32461157 Eucalyptus grandis
Eucgr.K02441 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32459158-32461157 Eucalyptus grandis
Eucgr.K02441 2.0kb downstream 2.0kb downstream 8619 true Chr11: 32450539-32459157 Eucalyptus grandis
Eucgr.K02441 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32450539-32452538 Eucalyptus grandis
Eucgr.K02441 5.0kb upstream 5.0kb upstream 11619 true Chr11: 32452539-32464157 Eucalyptus grandis
Eucgr.K02441 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32459158-32464157 Eucalyptus grandis
Eucgr.K02441 5.0kb downstream 5.0kb downstream 11619 true Chr11: 32447539-32459157 Eucalyptus grandis
Eucgr.K02441 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32447539-32452538 Eucalyptus grandis
Eucgr.K02441 10.0kb upstream 10.0kb upstream 16619 true Chr11: 32452539-32469157 Eucalyptus grandis
Eucgr.K02441 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32459158-32469157 Eucalyptus grandis
Eucgr.K02441 10.0kb downstream 10.0kb downstream 16619 true Chr11: 32442539-32459157 Eucalyptus grandis
Eucgr.K02441 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32442539-32452538 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073191 5270 Rosid View MSA
123742525 5271 Pentapetalae View MSA
122795067 5272 Eudicot View MSA
122048679 5273 Angiosperm View MSA
121346157 5274 Embryophyte View MSA
123427992 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.4478 0.0 34.3355   Low
cufflinks 21.088 0.0 47.4792    
cufflinks 16.0126 0.0 40.7667    
cufflinks 25.8232 0.0 63.8483   High
cufflinks 19.6709 0.0 52.5749    
cufflinks 15.3383 0.0 34.6197    

0 Strain