Gene : Eucgr.K02460 E. grandis v2.0
Defline:  (1 of 3) PTHR19229//PTHR19229:SF127 - ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA Genomic Order:  2068
Name:  ? Eucgr.K02460 Secondary Identifier:  ? PAC:32069620
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02460 0.5kb upstream 0.5kb upstream 9570 true Chr11: 32687088-32696657 Eucalyptus grandis
Eucgr.K02460 0.5kb upstream 0.5kb upstream 500 false Chr11: 32687088-32687587 Eucalyptus grandis
Eucgr.K02460 0.5kb downstream 0.5kb downstream 9570 true Chr11: 32687588-32697157 Eucalyptus grandis
Eucgr.K02460 0.5kb downstream 0.5kb downstream 500 false Chr11: 32696658-32697157 Eucalyptus grandis
Eucgr.K02460 1.0kb upstream 1.0kb upstream 10070 true Chr11: 32686588-32696657 Eucalyptus grandis
Eucgr.K02460 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32686588-32687587 Eucalyptus grandis
Eucgr.K02460 1.0kb downstream 1.0kb downstream 10070 true Chr11: 32687588-32697657 Eucalyptus grandis
Eucgr.K02460 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32696658-32697657 Eucalyptus grandis
Eucgr.K02460 2.0kb upstream 2.0kb upstream 11070 true Chr11: 32685588-32696657 Eucalyptus grandis
Eucgr.K02460 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32685588-32687587 Eucalyptus grandis
Eucgr.K02460 2.0kb downstream 2.0kb downstream 11070 true Chr11: 32687588-32698657 Eucalyptus grandis
Eucgr.K02460 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32696658-32698657 Eucalyptus grandis
Eucgr.K02460 5.0kb upstream 5.0kb upstream 14070 true Chr11: 32682588-32696657 Eucalyptus grandis
Eucgr.K02460 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32682588-32687587 Eucalyptus grandis
Eucgr.K02460 5.0kb downstream 5.0kb downstream 14070 true Chr11: 32687588-32701657 Eucalyptus grandis
Eucgr.K02460 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32696658-32701657 Eucalyptus grandis
Eucgr.K02460 10.0kb upstream 10.0kb upstream 19070 true Chr11: 32677588-32696657 Eucalyptus grandis
Eucgr.K02460 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32677588-32687587 Eucalyptus grandis
Eucgr.K02460 10.0kb downstream 10.0kb downstream 19070 true Chr11: 32687588-32706657 Eucalyptus grandis
Eucgr.K02460 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32696658-32706657 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041021 5273 Angiosperm View MSA
124064975 5270 Rosid View MSA
123738851 5271 Pentapetalae View MSA
122789582 5272 Eudicot View MSA
123429075 5275 Viridiplantae View MSA
121349830 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.14109 0.0 3.07501    
cufflinks 0.264684 0.0 0.829634 Low Low
cufflinks 0.28451 0.0 0.887196 Low Low
cufflinks 1.55797 0.0 4.03182   High
cufflinks 0.908462 0.0 2.49123    
cufflinks 0.497852 0.0 1.47194 Low  

0 Strain