Gene : Eucgr.K02457 E. grandis v2.0
Defline:  (1 of 3) PTHR19229//PTHR19229:SF127 - ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA Genomic Order:  2066
Name:  ? Eucgr.K02457 Secondary Identifier:  ? PAC:32068388
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02457 0.5kb upstream 0.5kb upstream 12594 true Chr11: 32642749-32655342 Eucalyptus grandis
Eucgr.K02457 0.5kb upstream 0.5kb upstream 500 false Chr11: 32642749-32643248 Eucalyptus grandis
Eucgr.K02457 0.5kb downstream 0.5kb downstream 12594 true Chr11: 32643249-32655842 Eucalyptus grandis
Eucgr.K02457 0.5kb downstream 0.5kb downstream 500 false Chr11: 32655343-32655842 Eucalyptus grandis
Eucgr.K02457 1.0kb upstream 1.0kb upstream 13094 true Chr11: 32642249-32655342 Eucalyptus grandis
Eucgr.K02457 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32642249-32643248 Eucalyptus grandis
Eucgr.K02457 1.0kb downstream 1.0kb downstream 13094 true Chr11: 32643249-32656342 Eucalyptus grandis
Eucgr.K02457 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32655343-32656342 Eucalyptus grandis
Eucgr.K02457 2.0kb upstream 2.0kb upstream 14094 true Chr11: 32641249-32655342 Eucalyptus grandis
Eucgr.K02457 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32641249-32643248 Eucalyptus grandis
Eucgr.K02457 2.0kb downstream 2.0kb downstream 14094 true Chr11: 32643249-32657342 Eucalyptus grandis
Eucgr.K02457 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32655343-32657342 Eucalyptus grandis
Eucgr.K02457 5.0kb upstream 5.0kb upstream 17094 true Chr11: 32638249-32655342 Eucalyptus grandis
Eucgr.K02457 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32638249-32643248 Eucalyptus grandis
Eucgr.K02457 5.0kb downstream 5.0kb downstream 17094 true Chr11: 32643249-32660342 Eucalyptus grandis
Eucgr.K02457 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32655343-32660342 Eucalyptus grandis
Eucgr.K02457 10.0kb upstream 10.0kb upstream 22094 true Chr11: 32633249-32655342 Eucalyptus grandis
Eucgr.K02457 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32633249-32643248 Eucalyptus grandis
Eucgr.K02457 10.0kb downstream 10.0kb downstream 22094 true Chr11: 32643249-32665342 Eucalyptus grandis
Eucgr.K02457 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32655343-32665342 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041021 5273 Angiosperm View MSA
124064975 5270 Rosid View MSA
123738851 5271 Pentapetalae View MSA
122789582 5272 Eudicot View MSA
123429075 5275 Viridiplantae View MSA
121349830 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00261796 0.0 0.0366018 Low Low
cufflinks 0.0369424 0.0 0.166576 Low  
cufflinks 0.0299029 0.0 0.143547 Low  
cufflinks 0.0106505 0.0 0.0803441 Low  
cufflinks 0.0421814 0.0 0.187754 Low  

0 Strain