Gene : Eucgr.K02434 E. grandis v2.0
Defline:  (1 of 39) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  2046
Name:  ? Eucgr.K02434 Secondary Identifier:  ? PAC:32068209
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02434 0.5kb upstream 0.5kb upstream 2353 true Chr11: 32367676-32370028 Eucalyptus grandis
Eucgr.K02434 0.5kb upstream 0.5kb upstream 500 false Chr11: 32367676-32368175 Eucalyptus grandis
Eucgr.K02434 0.5kb downstream 0.5kb downstream 2353 true Chr11: 32368176-32370528 Eucalyptus grandis
Eucgr.K02434 0.5kb downstream 0.5kb downstream 500 false Chr11: 32370029-32370528 Eucalyptus grandis
Eucgr.K02434 1.0kb upstream 1.0kb upstream 2853 true Chr11: 32367176-32370028 Eucalyptus grandis
Eucgr.K02434 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32367176-32368175 Eucalyptus grandis
Eucgr.K02434 1.0kb downstream 1.0kb downstream 2853 true Chr11: 32368176-32371028 Eucalyptus grandis
Eucgr.K02434 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32370029-32371028 Eucalyptus grandis
Eucgr.K02434 2.0kb upstream 2.0kb upstream 3853 true Chr11: 32366176-32370028 Eucalyptus grandis
Eucgr.K02434 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32366176-32368175 Eucalyptus grandis
Eucgr.K02434 2.0kb downstream 2.0kb downstream 3853 true Chr11: 32368176-32372028 Eucalyptus grandis
Eucgr.K02434 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32370029-32372028 Eucalyptus grandis
Eucgr.K02434 5.0kb upstream 5.0kb upstream 6853 true Chr11: 32363176-32370028 Eucalyptus grandis
Eucgr.K02434 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32363176-32368175 Eucalyptus grandis
Eucgr.K02434 5.0kb downstream 5.0kb downstream 6853 true Chr11: 32368176-32375028 Eucalyptus grandis
Eucgr.K02434 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32370029-32375028 Eucalyptus grandis
Eucgr.K02434 10.0kb upstream 10.0kb upstream 11853 true Chr11: 32358176-32370028 Eucalyptus grandis
Eucgr.K02434 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32358176-32368175 Eucalyptus grandis
Eucgr.K02434 10.0kb downstream 10.0kb downstream 11853 true Chr11: 32368176-32380028 Eucalyptus grandis
Eucgr.K02434 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32370029-32380028 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027787 5273 Angiosperm View MSA
124069936 5270 Rosid View MSA
123745991 5271 Pentapetalae View MSA
122796548 5272 Eudicot View MSA
123429074 5275 Viridiplantae View MSA
121297395 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain