Gene : Eucgr.K02436 E. grandis v2.0
Defline:  (1 of 1) PTHR23205 - SPLICING FACTOR 3A SUBUNIT 2 Genomic Order:  2048
Name:  ? Eucgr.K02436 Secondary Identifier:  ? PAC:32066457
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02436 0.5kb upstream 0.5kb upstream 4371 true Chr11: 32380888-32385258 Eucalyptus grandis
Eucgr.K02436 0.5kb upstream 0.5kb upstream 500 false Chr11: 32384759-32385258 Eucalyptus grandis
Eucgr.K02436 0.5kb downstream 0.5kb downstream 4371 true Chr11: 32380388-32384758 Eucalyptus grandis
Eucgr.K02436 0.5kb downstream 0.5kb downstream 500 false Chr11: 32380388-32380887 Eucalyptus grandis
Eucgr.K02436 1.0kb upstream 1.0kb upstream 4871 true Chr11: 32380888-32385758 Eucalyptus grandis
Eucgr.K02436 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32384759-32385758 Eucalyptus grandis
Eucgr.K02436 1.0kb downstream 1.0kb downstream 4871 true Chr11: 32379888-32384758 Eucalyptus grandis
Eucgr.K02436 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32379888-32380887 Eucalyptus grandis
Eucgr.K02436 2.0kb upstream 2.0kb upstream 5871 true Chr11: 32380888-32386758 Eucalyptus grandis
Eucgr.K02436 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32384759-32386758 Eucalyptus grandis
Eucgr.K02436 2.0kb downstream 2.0kb downstream 5871 true Chr11: 32378888-32384758 Eucalyptus grandis
Eucgr.K02436 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32378888-32380887 Eucalyptus grandis
Eucgr.K02436 5.0kb upstream 5.0kb upstream 8871 true Chr11: 32380888-32389758 Eucalyptus grandis
Eucgr.K02436 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32384759-32389758 Eucalyptus grandis
Eucgr.K02436 5.0kb downstream 5.0kb downstream 8871 true Chr11: 32375888-32384758 Eucalyptus grandis
Eucgr.K02436 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32375888-32380887 Eucalyptus grandis
Eucgr.K02436 10.0kb upstream 10.0kb upstream 13871 true Chr11: 32380888-32394758 Eucalyptus grandis
Eucgr.K02436 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32384759-32394758 Eucalyptus grandis
Eucgr.K02436 10.0kb downstream 10.0kb downstream 13871 true Chr11: 32370888-32384758 Eucalyptus grandis
Eucgr.K02436 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32370888-32380887 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064225 5270 Rosid View MSA
123745899 5271 Pentapetalae View MSA
122793816 5272 Eudicot View MSA
122043873 5273 Angiosperm View MSA
121344235 5274 Embryophyte View MSA
123425065 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.8541 0.0 94.769 High High
cufflinks 19.9291 0.0 45.0357    
cufflinks 40.5547 0.0 89.7162 High High
cufflinks 16.3379 0.0 37.3825   Low
cufflinks 22.1636 0.0 49.6664    
cufflinks 30.1904 0.0 66.9294    

0 Strain