Gene : Eucgr.K02351 E. grandis v2.0
Defline:  (1 of 3) PTHR22536 - LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN Genomic Order:  1979
Name:  ? Eucgr.K02351 Secondary Identifier:  ? PAC:32069648
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02351 0.5kb upstream 0.5kb upstream 2919 true Chr11: 31274328-31277246 Eucalyptus grandis
Eucgr.K02351 0.5kb upstream 0.5kb upstream 500 false Chr11: 31274328-31274827 Eucalyptus grandis
Eucgr.K02351 0.5kb downstream 0.5kb downstream 2919 true Chr11: 31274828-31277746 Eucalyptus grandis
Eucgr.K02351 0.5kb downstream 0.5kb downstream 500 false Chr11: 31277247-31277746 Eucalyptus grandis
Eucgr.K02351 1.0kb upstream 1.0kb upstream 3419 true Chr11: 31273828-31277246 Eucalyptus grandis
Eucgr.K02351 1.0kb upstream 1.0kb upstream 1000 false Chr11: 31273828-31274827 Eucalyptus grandis
Eucgr.K02351 1.0kb downstream 1.0kb downstream 3419 true Chr11: 31274828-31278246 Eucalyptus grandis
Eucgr.K02351 1.0kb downstream 1.0kb downstream 1000 false Chr11: 31277247-31278246 Eucalyptus grandis
Eucgr.K02351 2.0kb upstream 2.0kb upstream 4419 true Chr11: 31272828-31277246 Eucalyptus grandis
Eucgr.K02351 2.0kb upstream 2.0kb upstream 2000 false Chr11: 31272828-31274827 Eucalyptus grandis
Eucgr.K02351 2.0kb downstream 2.0kb downstream 4419 true Chr11: 31274828-31279246 Eucalyptus grandis
Eucgr.K02351 2.0kb downstream 2.0kb downstream 2000 false Chr11: 31277247-31279246 Eucalyptus grandis
Eucgr.K02351 5.0kb upstream 5.0kb upstream 7419 true Chr11: 31269828-31277246 Eucalyptus grandis
Eucgr.K02351 5.0kb upstream 5.0kb upstream 5000 false Chr11: 31269828-31274827 Eucalyptus grandis
Eucgr.K02351 5.0kb downstream 5.0kb downstream 7419 true Chr11: 31274828-31282246 Eucalyptus grandis
Eucgr.K02351 5.0kb downstream 5.0kb downstream 5000 false Chr11: 31277247-31282246 Eucalyptus grandis
Eucgr.K02351 10.0kb upstream 10.0kb upstream 12419 true Chr11: 31264828-31277246 Eucalyptus grandis
Eucgr.K02351 10.0kb upstream 10.0kb upstream 10000 false Chr11: 31264828-31274827 Eucalyptus grandis
Eucgr.K02351 10.0kb downstream 10.0kb downstream 12419 true Chr11: 31274828-31287246 Eucalyptus grandis
Eucgr.K02351 10.0kb downstream 10.0kb downstream 10000 false Chr11: 31277247-31287246 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074053 5270 Rosid View MSA
123743720 5271 Pentapetalae View MSA
122789289 5272 Eudicot View MSA
122041858 5273 Angiosperm View MSA
121345817 5274 Embryophyte View MSA
123425736 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.42464 0.0 17.0081    
cufflinks 6.08669 0.0 16.0833    
cufflinks 10.9003 0.0 27.3061   High
cufflinks 5.41772 0.0 14.504    
cufflinks 6.36642 0.0 16.7773    
cufflinks 4.82705 0.0 13.2632   Low

0 Strain