Gene : Eucgr.K02362 E. grandis v2.0
Defline:  (1 of 1) PTHR34803:SF2 - PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLASTIC Genomic Order:  1989
Name:  ? Eucgr.K02362 Secondary Identifier:  ? PAC:32068760
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PHOTOALL-PWY Eucalyptus grandis pathologic  
Egrandis PWY-101 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02362 0.5kb upstream 0.5kb upstream 4360 true Chr11: 31357579-31361938 Eucalyptus grandis
Eucgr.K02362 0.5kb upstream 0.5kb upstream 500 false Chr11: 31357579-31358078 Eucalyptus grandis
Eucgr.K02362 0.5kb downstream 0.5kb downstream 4360 true Chr11: 31358079-31362438 Eucalyptus grandis
Eucgr.K02362 0.5kb downstream 0.5kb downstream 500 false Chr11: 31361939-31362438 Eucalyptus grandis
Eucgr.K02362 1.0kb upstream 1.0kb upstream 4860 true Chr11: 31357079-31361938 Eucalyptus grandis
Eucgr.K02362 1.0kb upstream 1.0kb upstream 1000 false Chr11: 31357079-31358078 Eucalyptus grandis
Eucgr.K02362 1.0kb downstream 1.0kb downstream 4860 true Chr11: 31358079-31362938 Eucalyptus grandis
Eucgr.K02362 1.0kb downstream 1.0kb downstream 1000 false Chr11: 31361939-31362938 Eucalyptus grandis
Eucgr.K02362 2.0kb upstream 2.0kb upstream 5860 true Chr11: 31356079-31361938 Eucalyptus grandis
Eucgr.K02362 2.0kb upstream 2.0kb upstream 2000 false Chr11: 31356079-31358078 Eucalyptus grandis
Eucgr.K02362 2.0kb downstream 2.0kb downstream 5860 true Chr11: 31358079-31363938 Eucalyptus grandis
Eucgr.K02362 2.0kb downstream 2.0kb downstream 2000 false Chr11: 31361939-31363938 Eucalyptus grandis
Eucgr.K02362 5.0kb upstream 5.0kb upstream 8860 true Chr11: 31353079-31361938 Eucalyptus grandis
Eucgr.K02362 5.0kb upstream 5.0kb upstream 5000 false Chr11: 31353079-31358078 Eucalyptus grandis
Eucgr.K02362 5.0kb downstream 5.0kb downstream 8860 true Chr11: 31358079-31366938 Eucalyptus grandis
Eucgr.K02362 5.0kb downstream 5.0kb downstream 5000 false Chr11: 31361939-31366938 Eucalyptus grandis
Eucgr.K02362 10.0kb upstream 10.0kb upstream 13860 true Chr11: 31348079-31361938 Eucalyptus grandis
Eucgr.K02362 10.0kb upstream 10.0kb upstream 10000 false Chr11: 31348079-31358078 Eucalyptus grandis
Eucgr.K02362 10.0kb downstream 10.0kb downstream 13860 true Chr11: 31358079-31371938 Eucalyptus grandis
Eucgr.K02362 10.0kb downstream 10.0kb downstream 10000 false Chr11: 31361939-31371938 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040995 5273 Angiosperm View MSA
124061167 5270 Rosid View MSA
123750401 5271 Pentapetalae View MSA
122793402 5272 Eudicot View MSA
121343870 5274 Embryophyte View MSA
123424325 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 292.848 0.0 773.475 High  
cufflinks 18.5697 0.0 48.8745    
cufflinks 120.023 0.0 301.125 High  
cufflinks 3.17135 0.0 9.24642   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 972.522 0.0 3779.61 High High

0 Strain