Gene : Eucgr.K02360 E. grandis v2.0
Defline:  (1 of 1) PTHR12866:SF5 - UBIQUITIN-LIKE-CONJUGATING ENZYME ATG10 Genomic Order:  1987
Name:  ? Eucgr.K02360 Secondary Identifier:  ? PAC:32068880
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02360 0.5kb upstream 0.5kb upstream 2935 true Chr11: 31347100-31350034 Eucalyptus grandis
Eucgr.K02360 0.5kb upstream 0.5kb upstream 500 false Chr11: 31347100-31347599 Eucalyptus grandis
Eucgr.K02360 0.5kb downstream 0.5kb downstream 2935 true Chr11: 31347600-31350534 Eucalyptus grandis
Eucgr.K02360 0.5kb downstream 0.5kb downstream 500 false Chr11: 31350035-31350534 Eucalyptus grandis
Eucgr.K02360 1.0kb upstream 1.0kb upstream 3435 true Chr11: 31346600-31350034 Eucalyptus grandis
Eucgr.K02360 1.0kb upstream 1.0kb upstream 1000 false Chr11: 31346600-31347599 Eucalyptus grandis
Eucgr.K02360 1.0kb downstream 1.0kb downstream 3435 true Chr11: 31347600-31351034 Eucalyptus grandis
Eucgr.K02360 1.0kb downstream 1.0kb downstream 1000 false Chr11: 31350035-31351034 Eucalyptus grandis
Eucgr.K02360 2.0kb upstream 2.0kb upstream 4435 true Chr11: 31345600-31350034 Eucalyptus grandis
Eucgr.K02360 2.0kb upstream 2.0kb upstream 2000 false Chr11: 31345600-31347599 Eucalyptus grandis
Eucgr.K02360 2.0kb downstream 2.0kb downstream 4435 true Chr11: 31347600-31352034 Eucalyptus grandis
Eucgr.K02360 2.0kb downstream 2.0kb downstream 2000 false Chr11: 31350035-31352034 Eucalyptus grandis
Eucgr.K02360 5.0kb upstream 5.0kb upstream 7435 true Chr11: 31342600-31350034 Eucalyptus grandis
Eucgr.K02360 5.0kb upstream 5.0kb upstream 5000 false Chr11: 31342600-31347599 Eucalyptus grandis
Eucgr.K02360 5.0kb downstream 5.0kb downstream 7435 true Chr11: 31347600-31355034 Eucalyptus grandis
Eucgr.K02360 5.0kb downstream 5.0kb downstream 5000 false Chr11: 31350035-31355034 Eucalyptus grandis
Eucgr.K02360 10.0kb upstream 10.0kb upstream 12435 true Chr11: 31337600-31350034 Eucalyptus grandis
Eucgr.K02360 10.0kb upstream 10.0kb upstream 10000 false Chr11: 31337600-31347599 Eucalyptus grandis
Eucgr.K02360 10.0kb downstream 10.0kb downstream 12435 true Chr11: 31347600-31360034 Eucalyptus grandis
Eucgr.K02360 10.0kb downstream 10.0kb downstream 10000 false Chr11: 31350035-31360034 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065951 5270 Rosid View MSA
123738819 5271 Pentapetalae View MSA
122789693 5272 Eudicot View MSA
122045044 5273 Angiosperm View MSA
121344822 5274 Embryophyte View MSA
123380107 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.1329 0.0 36.0713   High
cufflinks 8.0098 0.0 21.0466    
cufflinks 12.7963 0.0 31.4185    
cufflinks 5.88708 0.0 17.3734   Low
cufflinks 9.4746 0.0 24.1401    
cufflinks 12.2355 0.0 30.013    

0 Strain