Gene : Eucgr.K02339 E. grandis v2.0
Defline:  (1 of 4) PTHR19139:SF30 - AQUAPORIN TIP3-1-RELATED Genomic Order:  1968
Name:  ? Eucgr.K02339 Secondary Identifier:  ? PAC:32069006
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02339 0.5kb upstream 0.5kb upstream 2350 true Chr11: 31190817-31193166 Eucalyptus grandis
Eucgr.K02339 0.5kb upstream 0.5kb upstream 500 false Chr11: 31190817-31191316 Eucalyptus grandis
Eucgr.K02339 0.5kb downstream 0.5kb downstream 2350 true Chr11: 31191317-31193666 Eucalyptus grandis
Eucgr.K02339 0.5kb downstream 0.5kb downstream 500 false Chr11: 31193167-31193666 Eucalyptus grandis
Eucgr.K02339 1.0kb upstream 1.0kb upstream 2850 true Chr11: 31190317-31193166 Eucalyptus grandis
Eucgr.K02339 1.0kb upstream 1.0kb upstream 1000 false Chr11: 31190317-31191316 Eucalyptus grandis
Eucgr.K02339 1.0kb downstream 1.0kb downstream 2850 true Chr11: 31191317-31194166 Eucalyptus grandis
Eucgr.K02339 1.0kb downstream 1.0kb downstream 1000 false Chr11: 31193167-31194166 Eucalyptus grandis
Eucgr.K02339 2.0kb upstream 2.0kb upstream 3850 true Chr11: 31189317-31193166 Eucalyptus grandis
Eucgr.K02339 2.0kb upstream 2.0kb upstream 2000 false Chr11: 31189317-31191316 Eucalyptus grandis
Eucgr.K02339 2.0kb downstream 2.0kb downstream 3850 true Chr11: 31191317-31195166 Eucalyptus grandis
Eucgr.K02339 2.0kb downstream 2.0kb downstream 2000 false Chr11: 31193167-31195166 Eucalyptus grandis
Eucgr.K02339 5.0kb upstream 5.0kb upstream 6850 true Chr11: 31186317-31193166 Eucalyptus grandis
Eucgr.K02339 5.0kb upstream 5.0kb upstream 5000 false Chr11: 31186317-31191316 Eucalyptus grandis
Eucgr.K02339 5.0kb downstream 5.0kb downstream 6850 true Chr11: 31191317-31198166 Eucalyptus grandis
Eucgr.K02339 5.0kb downstream 5.0kb downstream 5000 false Chr11: 31193167-31198166 Eucalyptus grandis
Eucgr.K02339 10.0kb upstream 10.0kb upstream 11850 true Chr11: 31181317-31193166 Eucalyptus grandis
Eucgr.K02339 10.0kb upstream 10.0kb upstream 10000 false Chr11: 31181317-31191316 Eucalyptus grandis
Eucgr.K02339 10.0kb downstream 10.0kb downstream 11850 true Chr11: 31191317-31203166 Eucalyptus grandis
Eucgr.K02339 10.0kb downstream 10.0kb downstream 10000 false Chr11: 31193167-31203166 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064824 5270 Rosid View MSA
123744186 5271 Pentapetalae View MSA
122786235 5272 Eudicot View MSA
122044234 5273 Angiosperm View MSA
121351438 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.348916 0.0 1.30469 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.186658 0.0 0.845251 Low Low
cufflinks 0.358914 0.0 1.35229 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain