Gene : Eucgr.K02998 E. grandis v2.0
Defline:  (1 of 1) PTHR10367 - MRNA-CAPPING ENZYME Genomic Order:  2489
Name:  ? Eucgr.K02998 Secondary Identifier:  ? PAC:32067290
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02998 0.5kb upstream 0.5kb upstream 16830 true Chr11: 37453214-37470043 Eucalyptus grandis
Eucgr.K02998 0.5kb upstream 0.5kb upstream 500 false Chr11: 37469544-37470043 Eucalyptus grandis
Eucgr.K02998 0.5kb downstream 0.5kb downstream 16830 true Chr11: 37452714-37469543 Eucalyptus grandis
Eucgr.K02998 0.5kb downstream 0.5kb downstream 500 false Chr11: 37452714-37453213 Eucalyptus grandis
Eucgr.K02998 1.0kb upstream 1.0kb upstream 17330 true Chr11: 37453214-37470543 Eucalyptus grandis
Eucgr.K02998 1.0kb upstream 1.0kb upstream 1000 false Chr11: 37469544-37470543 Eucalyptus grandis
Eucgr.K02998 1.0kb downstream 1.0kb downstream 17330 true Chr11: 37452214-37469543 Eucalyptus grandis
Eucgr.K02998 1.0kb downstream 1.0kb downstream 1000 false Chr11: 37452214-37453213 Eucalyptus grandis
Eucgr.K02998 2.0kb upstream 2.0kb upstream 18330 true Chr11: 37453214-37471543 Eucalyptus grandis
Eucgr.K02998 2.0kb upstream 2.0kb upstream 2000 false Chr11: 37469544-37471543 Eucalyptus grandis
Eucgr.K02998 2.0kb downstream 2.0kb downstream 18330 true Chr11: 37451214-37469543 Eucalyptus grandis
Eucgr.K02998 2.0kb downstream 2.0kb downstream 2000 false Chr11: 37451214-37453213 Eucalyptus grandis
Eucgr.K02998 5.0kb upstream 5.0kb upstream 21330 true Chr11: 37453214-37474543 Eucalyptus grandis
Eucgr.K02998 5.0kb upstream 5.0kb upstream 5000 false Chr11: 37469544-37474543 Eucalyptus grandis
Eucgr.K02998 5.0kb downstream 5.0kb downstream 21330 true Chr11: 37448214-37469543 Eucalyptus grandis
Eucgr.K02998 5.0kb downstream 5.0kb downstream 5000 false Chr11: 37448214-37453213 Eucalyptus grandis
Eucgr.K02998 10.0kb upstream 10.0kb upstream 26330 true Chr11: 37453214-37479543 Eucalyptus grandis
Eucgr.K02998 10.0kb upstream 10.0kb upstream 10000 false Chr11: 37469544-37479543 Eucalyptus grandis
Eucgr.K02998 10.0kb downstream 10.0kb downstream 26330 true Chr11: 37443214-37469543 Eucalyptus grandis
Eucgr.K02998 10.0kb downstream 10.0kb downstream 10000 false Chr11: 37443214-37453213 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065683 5270 Rosid View MSA
123738577 5271 Pentapetalae View MSA
122791421 5272 Eudicot View MSA
122046582 5273 Angiosperm View MSA
121350766 5274 Embryophyte View MSA
123427499 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.0475 0.0 60.0462   Low
cufflinks 35.2567 0.0 79.1485   High
cufflinks 31.244 0.0 69.7264 High  
cufflinks 30.1052 0.0 67.1848    
cufflinks 26.3722 0.0 58.557   Low
cufflinks 31.4893 0.0 70.0857    

0 Strain