Gene : Eucgr.K03013 E. grandis v2.0
Defline:  (1 of 2) PTHR21290//PTHR21290:SF29 - SPHINGOMYELIN SYNTHETASE Genomic Order:  2504
Name:  ? Eucgr.K03013 Secondary Identifier:  ? PAC:32068101
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03013 0.5kb upstream 0.5kb upstream 5041 true Chr11: 37587454-37592494 Eucalyptus grandis
Eucgr.K03013 0.5kb upstream 0.5kb upstream 500 false Chr11: 37591995-37592494 Eucalyptus grandis
Eucgr.K03013 0.5kb downstream 0.5kb downstream 5041 true Chr11: 37586954-37591994 Eucalyptus grandis
Eucgr.K03013 0.5kb downstream 0.5kb downstream 500 false Chr11: 37586954-37587453 Eucalyptus grandis
Eucgr.K03013 1.0kb upstream 1.0kb upstream 5541 true Chr11: 37587454-37592994 Eucalyptus grandis
Eucgr.K03013 1.0kb upstream 1.0kb upstream 1000 false Chr11: 37591995-37592994 Eucalyptus grandis
Eucgr.K03013 1.0kb downstream 1.0kb downstream 5541 true Chr11: 37586454-37591994 Eucalyptus grandis
Eucgr.K03013 1.0kb downstream 1.0kb downstream 1000 false Chr11: 37586454-37587453 Eucalyptus grandis
Eucgr.K03013 2.0kb upstream 2.0kb upstream 6541 true Chr11: 37587454-37593994 Eucalyptus grandis
Eucgr.K03013 2.0kb upstream 2.0kb upstream 2000 false Chr11: 37591995-37593994 Eucalyptus grandis
Eucgr.K03013 2.0kb downstream 2.0kb downstream 6541 true Chr11: 37585454-37591994 Eucalyptus grandis
Eucgr.K03013 2.0kb downstream 2.0kb downstream 2000 false Chr11: 37585454-37587453 Eucalyptus grandis
Eucgr.K03013 5.0kb upstream 5.0kb upstream 9541 true Chr11: 37587454-37596994 Eucalyptus grandis
Eucgr.K03013 5.0kb upstream 5.0kb upstream 5000 false Chr11: 37591995-37596994 Eucalyptus grandis
Eucgr.K03013 5.0kb downstream 5.0kb downstream 9541 true Chr11: 37582454-37591994 Eucalyptus grandis
Eucgr.K03013 5.0kb downstream 5.0kb downstream 5000 false Chr11: 37582454-37587453 Eucalyptus grandis
Eucgr.K03013 10.0kb upstream 10.0kb upstream 14541 true Chr11: 37587454-37601994 Eucalyptus grandis
Eucgr.K03013 10.0kb upstream 10.0kb upstream 10000 false Chr11: 37591995-37601994 Eucalyptus grandis
Eucgr.K03013 10.0kb downstream 10.0kb downstream 14541 true Chr11: 37577454-37591994 Eucalyptus grandis
Eucgr.K03013 10.0kb downstream 10.0kb downstream 10000 false Chr11: 37577454-37587453 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064547 5270 Rosid View MSA
123744784 5271 Pentapetalae View MSA
122788943 5272 Eudicot View MSA
122046269 5273 Angiosperm View MSA
121346433 5274 Embryophyte View MSA
123427335 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 155.428 0.0 372.586 High  
cufflinks 179.232 0.0 437.783 High  
cufflinks 136.674 0.0 323.61 High  
cufflinks 182.219 0.0 444.962 High  
cufflinks 204.333 0.0 504.395 High High
cufflinks 120.256 0.0 281.045 High Low

0 Strain