Gene : Eucgr.K02953 E. grandis v2.0
Defline:  (1 of 1) PTHR11289 - BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2 Genomic Order:  2447
Name:  ? Eucgr.K02953 Secondary Identifier:  ? PAC:32066339
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02953 0.5kb upstream 0.5kb upstream 9776 true Chr11: 36979926-36989701 Eucalyptus grandis
Eucgr.K02953 0.5kb upstream 0.5kb upstream 500 false Chr11: 36979926-36980425 Eucalyptus grandis
Eucgr.K02953 0.5kb downstream 0.5kb downstream 9776 true Chr11: 36980426-36990201 Eucalyptus grandis
Eucgr.K02953 0.5kb downstream 0.5kb downstream 500 false Chr11: 36989702-36990201 Eucalyptus grandis
Eucgr.K02953 1.0kb upstream 1.0kb upstream 10276 true Chr11: 36979426-36989701 Eucalyptus grandis
Eucgr.K02953 1.0kb upstream 1.0kb upstream 1000 false Chr11: 36979426-36980425 Eucalyptus grandis
Eucgr.K02953 1.0kb downstream 1.0kb downstream 10276 true Chr11: 36980426-36990701 Eucalyptus grandis
Eucgr.K02953 1.0kb downstream 1.0kb downstream 1000 false Chr11: 36989702-36990701 Eucalyptus grandis
Eucgr.K02953 2.0kb upstream 2.0kb upstream 11276 true Chr11: 36978426-36989701 Eucalyptus grandis
Eucgr.K02953 2.0kb upstream 2.0kb upstream 2000 false Chr11: 36978426-36980425 Eucalyptus grandis
Eucgr.K02953 2.0kb downstream 2.0kb downstream 11276 true Chr11: 36980426-36991701 Eucalyptus grandis
Eucgr.K02953 2.0kb downstream 2.0kb downstream 2000 false Chr11: 36989702-36991701 Eucalyptus grandis
Eucgr.K02953 5.0kb upstream 5.0kb upstream 14276 true Chr11: 36975426-36989701 Eucalyptus grandis
Eucgr.K02953 5.0kb upstream 5.0kb upstream 5000 false Chr11: 36975426-36980425 Eucalyptus grandis
Eucgr.K02953 5.0kb downstream 5.0kb downstream 14276 true Chr11: 36980426-36994701 Eucalyptus grandis
Eucgr.K02953 5.0kb downstream 5.0kb downstream 5000 false Chr11: 36989702-36994701 Eucalyptus grandis
Eucgr.K02953 10.0kb upstream 10.0kb upstream 19276 true Chr11: 36970426-36989701 Eucalyptus grandis
Eucgr.K02953 10.0kb upstream 10.0kb upstream 10000 false Chr11: 36970426-36980425 Eucalyptus grandis
Eucgr.K02953 10.0kb downstream 10.0kb downstream 19276 true Chr11: 36980426-36999701 Eucalyptus grandis
Eucgr.K02953 10.0kb downstream 10.0kb downstream 10000 false Chr11: 36989702-36999701 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050402 5270 Rosid View MSA
123749189 5271 Pentapetalae View MSA
122786519 5272 Eudicot View MSA
122044461 5273 Angiosperm View MSA
121310297 5274 Embryophyte View MSA
123425131 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.58618 0.0 3.96581    
cufflinks 0.282512 0.0 0.836024 Low Low
cufflinks 1.71082 0.0 4.22268    
cufflinks 0.339941 0.0 0.982929 Low  
cufflinks 0.88245 0.0 2.32551    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain