Gene : Eucgr.K02912 E. grandis v2.0
Defline:  (1 of 235) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2411
Name:  ? Eucgr.K02912 Secondary Identifier:  ? PAC:32069627
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02912 0.5kb upstream 0.5kb upstream 5062 true Chr11: 36337327-36342388 Eucalyptus grandis
Eucgr.K02912 0.5kb upstream 0.5kb upstream 500 false Chr11: 36341889-36342388 Eucalyptus grandis
Eucgr.K02912 0.5kb downstream 0.5kb downstream 5062 true Chr11: 36336827-36341888 Eucalyptus grandis
Eucgr.K02912 0.5kb downstream 0.5kb downstream 500 false Chr11: 36336827-36337326 Eucalyptus grandis
Eucgr.K02912 1.0kb upstream 1.0kb upstream 5562 true Chr11: 36337327-36342888 Eucalyptus grandis
Eucgr.K02912 1.0kb upstream 1.0kb upstream 1000 false Chr11: 36341889-36342888 Eucalyptus grandis
Eucgr.K02912 1.0kb downstream 1.0kb downstream 5562 true Chr11: 36336327-36341888 Eucalyptus grandis
Eucgr.K02912 1.0kb downstream 1.0kb downstream 1000 false Chr11: 36336327-36337326 Eucalyptus grandis
Eucgr.K02912 2.0kb upstream 2.0kb upstream 6562 true Chr11: 36337327-36343888 Eucalyptus grandis
Eucgr.K02912 2.0kb upstream 2.0kb upstream 2000 false Chr11: 36341889-36343888 Eucalyptus grandis
Eucgr.K02912 2.0kb downstream 2.0kb downstream 6562 true Chr11: 36335327-36341888 Eucalyptus grandis
Eucgr.K02912 2.0kb downstream 2.0kb downstream 2000 false Chr11: 36335327-36337326 Eucalyptus grandis
Eucgr.K02912 5.0kb upstream 5.0kb upstream 9562 true Chr11: 36337327-36346888 Eucalyptus grandis
Eucgr.K02912 5.0kb upstream 5.0kb upstream 5000 false Chr11: 36341889-36346888 Eucalyptus grandis
Eucgr.K02912 5.0kb downstream 5.0kb downstream 9562 true Chr11: 36332327-36341888 Eucalyptus grandis
Eucgr.K02912 5.0kb downstream 5.0kb downstream 5000 false Chr11: 36332327-36337326 Eucalyptus grandis
Eucgr.K02912 10.0kb upstream 10.0kb upstream 14562 true Chr11: 36337327-36351888 Eucalyptus grandis
Eucgr.K02912 10.0kb upstream 10.0kb upstream 10000 false Chr11: 36341889-36351888 Eucalyptus grandis
Eucgr.K02912 10.0kb downstream 10.0kb downstream 14562 true Chr11: 36327327-36341888 Eucalyptus grandis
Eucgr.K02912 10.0kb downstream 10.0kb downstream 10000 false Chr11: 36327327-36337326 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066157 5270 Rosid View MSA
123739123 5271 Pentapetalae View MSA
122794218 5272 Eudicot View MSA
122042407 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121350963 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.76678 0.0 19.5922    
cufflinks 7.90725 0.0 17.7061    
cufflinks 10.6515 0.0 23.6469    
cufflinks 21.2323 0.0 47.1564   High
cufflinks 15.3689 0.0 33.9874    
cufflinks 9.03534 0.0 20.2067    

0 Strain