Gene : Eucgr.K02900 E. grandis v2.0
Defline:  (1 of 3) PTHR21576:SF33 - F14D16.8-RELATED Genomic Order:  2402
Name:  ? Eucgr.K02900 Secondary Identifier:  ? PAC:32068622
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02900 0.5kb upstream 0.5kb upstream 2843 true Chr11: 36197172-36200014 Eucalyptus grandis
Eucgr.K02900 0.5kb upstream 0.5kb upstream 500 false Chr11: 36197172-36197671 Eucalyptus grandis
Eucgr.K02900 0.5kb downstream 0.5kb downstream 2843 true Chr11: 36197672-36200514 Eucalyptus grandis
Eucgr.K02900 0.5kb downstream 0.5kb downstream 500 false Chr11: 36200015-36200514 Eucalyptus grandis
Eucgr.K02900 1.0kb upstream 1.0kb upstream 3343 true Chr11: 36196672-36200014 Eucalyptus grandis
Eucgr.K02900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 36196672-36197671 Eucalyptus grandis
Eucgr.K02900 1.0kb downstream 1.0kb downstream 3343 true Chr11: 36197672-36201014 Eucalyptus grandis
Eucgr.K02900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 36200015-36201014 Eucalyptus grandis
Eucgr.K02900 2.0kb upstream 2.0kb upstream 4343 true Chr11: 36195672-36200014 Eucalyptus grandis
Eucgr.K02900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 36195672-36197671 Eucalyptus grandis
Eucgr.K02900 2.0kb downstream 2.0kb downstream 4343 true Chr11: 36197672-36202014 Eucalyptus grandis
Eucgr.K02900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 36200015-36202014 Eucalyptus grandis
Eucgr.K02900 5.0kb upstream 5.0kb upstream 7343 true Chr11: 36192672-36200014 Eucalyptus grandis
Eucgr.K02900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 36192672-36197671 Eucalyptus grandis
Eucgr.K02900 5.0kb downstream 5.0kb downstream 7343 true Chr11: 36197672-36205014 Eucalyptus grandis
Eucgr.K02900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 36200015-36205014 Eucalyptus grandis
Eucgr.K02900 10.0kb upstream 10.0kb upstream 12343 true Chr11: 36187672-36200014 Eucalyptus grandis
Eucgr.K02900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 36187672-36197671 Eucalyptus grandis
Eucgr.K02900 10.0kb downstream 10.0kb downstream 12343 true Chr11: 36197672-36210014 Eucalyptus grandis
Eucgr.K02900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 36200015-36210014 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070489 5270 Rosid View MSA
123751616 5271 Pentapetalae View MSA
122789851 5272 Eudicot View MSA
122046796 5273 Angiosperm View MSA
123429121 5275 Viridiplantae View MSA
121350674 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.45384 0.0 11.385    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.91025 0.0 7.7664    
cufflinks 0.371516 0.0 1.25146 Low Low
cufflinks 0.3552 0.0 1.20248 Low Low
cufflinks 7.03334 0.0 17.0796   High

0 Strain