Gene : Eucgr.K02867 E. grandis v2.0
Defline:  (1 of 2) PTHR12297 - HYPOXIA-INDUCBILE GENE 1 HIG1 -RELATED Genomic Order:  2369
Name:  ? Eucgr.K02867 Secondary Identifier:  ? PAC:32068638
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02867 0.5kb upstream 0.5kb upstream 2282 true Chr11: 35946948-35949229 Eucalyptus grandis
Eucgr.K02867 0.5kb upstream 0.5kb upstream 500 false Chr11: 35948730-35949229 Eucalyptus grandis
Eucgr.K02867 0.5kb downstream 0.5kb downstream 2282 true Chr11: 35946448-35948729 Eucalyptus grandis
Eucgr.K02867 0.5kb downstream 0.5kb downstream 500 false Chr11: 35946448-35946947 Eucalyptus grandis
Eucgr.K02867 1.0kb upstream 1.0kb upstream 2782 true Chr11: 35946948-35949729 Eucalyptus grandis
Eucgr.K02867 1.0kb upstream 1.0kb upstream 1000 false Chr11: 35948730-35949729 Eucalyptus grandis
Eucgr.K02867 1.0kb downstream 1.0kb downstream 2782 true Chr11: 35945948-35948729 Eucalyptus grandis
Eucgr.K02867 1.0kb downstream 1.0kb downstream 1000 false Chr11: 35945948-35946947 Eucalyptus grandis
Eucgr.K02867 2.0kb upstream 2.0kb upstream 3782 true Chr11: 35946948-35950729 Eucalyptus grandis
Eucgr.K02867 2.0kb upstream 2.0kb upstream 2000 false Chr11: 35948730-35950729 Eucalyptus grandis
Eucgr.K02867 2.0kb downstream 2.0kb downstream 3782 true Chr11: 35944948-35948729 Eucalyptus grandis
Eucgr.K02867 2.0kb downstream 2.0kb downstream 2000 false Chr11: 35944948-35946947 Eucalyptus grandis
Eucgr.K02867 5.0kb upstream 5.0kb upstream 6782 true Chr11: 35946948-35953729 Eucalyptus grandis
Eucgr.K02867 5.0kb upstream 5.0kb upstream 5000 false Chr11: 35948730-35953729 Eucalyptus grandis
Eucgr.K02867 5.0kb downstream 5.0kb downstream 6782 true Chr11: 35941948-35948729 Eucalyptus grandis
Eucgr.K02867 5.0kb downstream 5.0kb downstream 5000 false Chr11: 35941948-35946947 Eucalyptus grandis
Eucgr.K02867 10.0kb upstream 10.0kb upstream 11782 true Chr11: 35946948-35958729 Eucalyptus grandis
Eucgr.K02867 10.0kb upstream 10.0kb upstream 10000 false Chr11: 35948730-35958729 Eucalyptus grandis
Eucgr.K02867 10.0kb downstream 10.0kb downstream 11782 true Chr11: 35936948-35948729 Eucalyptus grandis
Eucgr.K02867 10.0kb downstream 10.0kb downstream 10000 false Chr11: 35936948-35946947 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069964 5270 Rosid View MSA
123750302 5271 Pentapetalae View MSA
122790917 5272 Eudicot View MSA
122045148 5273 Angiosperm View MSA
121347874 5274 Embryophyte View MSA
123423754 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.3658 0.0 98.914 High  
cufflinks 26.243 0.0 67.4281   Low
cufflinks 44.7957 0.0 109.427 High  
cufflinks 78.5057 0.0 182.105 High High
cufflinks 77.4832 0.0 178.832 High High
cufflinks 38.3006 0.0 95.1924 High  

0 Strain