Gene : Eucgr.K02874 E. grandis v2.0
Defline:  (1 of 9) KOG1700 - Regulatory protein MLP and related LIM proteins Genomic Order:  2376
Name:  ? Eucgr.K02874 Secondary Identifier:  ? PAC:32069132
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02874 0.5kb upstream 0.5kb upstream 4067 true Chr11: 35991782-35995848 Eucalyptus grandis
Eucgr.K02874 0.5kb upstream 0.5kb upstream 500 false Chr11: 35995349-35995848 Eucalyptus grandis
Eucgr.K02874 0.5kb downstream 0.5kb downstream 4067 true Chr11: 35991282-35995348 Eucalyptus grandis
Eucgr.K02874 0.5kb downstream 0.5kb downstream 500 false Chr11: 35991282-35991781 Eucalyptus grandis
Eucgr.K02874 1.0kb upstream 1.0kb upstream 4567 true Chr11: 35991782-35996348 Eucalyptus grandis
Eucgr.K02874 1.0kb upstream 1.0kb upstream 1000 false Chr11: 35995349-35996348 Eucalyptus grandis
Eucgr.K02874 1.0kb downstream 1.0kb downstream 4567 true Chr11: 35990782-35995348 Eucalyptus grandis
Eucgr.K02874 1.0kb downstream 1.0kb downstream 1000 false Chr11: 35990782-35991781 Eucalyptus grandis
Eucgr.K02874 2.0kb upstream 2.0kb upstream 5567 true Chr11: 35991782-35997348 Eucalyptus grandis
Eucgr.K02874 2.0kb upstream 2.0kb upstream 2000 false Chr11: 35995349-35997348 Eucalyptus grandis
Eucgr.K02874 2.0kb downstream 2.0kb downstream 5567 true Chr11: 35989782-35995348 Eucalyptus grandis
Eucgr.K02874 2.0kb downstream 2.0kb downstream 2000 false Chr11: 35989782-35991781 Eucalyptus grandis
Eucgr.K02874 5.0kb upstream 5.0kb upstream 8567 true Chr11: 35991782-36000348 Eucalyptus grandis
Eucgr.K02874 5.0kb upstream 5.0kb upstream 5000 false Chr11: 35995349-36000348 Eucalyptus grandis
Eucgr.K02874 5.0kb downstream 5.0kb downstream 8567 true Chr11: 35986782-35995348 Eucalyptus grandis
Eucgr.K02874 5.0kb downstream 5.0kb downstream 5000 false Chr11: 35986782-35991781 Eucalyptus grandis
Eucgr.K02874 10.0kb upstream 10.0kb upstream 13567 true Chr11: 35991782-36005348 Eucalyptus grandis
Eucgr.K02874 10.0kb upstream 10.0kb upstream 10000 false Chr11: 35995349-36005348 Eucalyptus grandis
Eucgr.K02874 10.0kb downstream 10.0kb downstream 13567 true Chr11: 35981782-35995348 Eucalyptus grandis
Eucgr.K02874 10.0kb downstream 10.0kb downstream 10000 false Chr11: 35981782-35991781 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124048992 5270 Rosid Singleton cluster - no MSA
123745629 5271 Pentapetalae View MSA
122793915 5272 Eudicot View MSA
122049992 5273 Angiosperm View MSA
121348284 5274 Embryophyte View MSA
123426269 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.48284 0.0 13.0924    
cufflinks 2.08046 0.0 7.54379   Low
cufflinks 4.82899 0.0 16.6086    
cufflinks 4.84938 0.0 18.548    
cufflinks 6.73041 0.0 31.9577   High
cufflinks 2.63499 0.0 10.3431    

0 Strain