Gene : Eucgr.K02815 E. grandis v2.0
Defline:  (1 of 2) PF00106//PF08659 - short chain dehydrogenase (adh_short) // KR domain (KR) Genomic Order:  2321
Name:  ? Eucgr.K02815 Secondary Identifier:  ? PAC:32066220
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5080 Eucalyptus grandis pathologic  
Egrandis PWY-6433 Eucalyptus grandis pathologic  
Egrandis PWY-6598 Eucalyptus grandis pathologic  
Egrandis PWY-7036 Eucalyptus grandis pathologic  
Egrandis PWY-7601 Eucalyptus grandis pathologic  
Egrandis PWY-7606 Eucalyptus grandis pathologic  
Egrandis PWY-7619 Eucalyptus grandis pathologic  
Egrandis PWY-7726 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02815 0.5kb upstream 0.5kb upstream 3566 true Chr11: 35487273-35490838 Eucalyptus grandis
Eucgr.K02815 0.5kb upstream 0.5kb upstream 500 false Chr11: 35487273-35487772 Eucalyptus grandis
Eucgr.K02815 0.5kb downstream 0.5kb downstream 3566 true Chr11: 35487773-35491338 Eucalyptus grandis
Eucgr.K02815 0.5kb downstream 0.5kb downstream 500 false Chr11: 35490839-35491338 Eucalyptus grandis
Eucgr.K02815 1.0kb upstream 1.0kb upstream 4066 true Chr11: 35486773-35490838 Eucalyptus grandis
Eucgr.K02815 1.0kb upstream 1.0kb upstream 1000 false Chr11: 35486773-35487772 Eucalyptus grandis
Eucgr.K02815 1.0kb downstream 1.0kb downstream 4066 true Chr11: 35487773-35491838 Eucalyptus grandis
Eucgr.K02815 1.0kb downstream 1.0kb downstream 1000 false Chr11: 35490839-35491838 Eucalyptus grandis
Eucgr.K02815 2.0kb upstream 2.0kb upstream 5066 true Chr11: 35485773-35490838 Eucalyptus grandis
Eucgr.K02815 2.0kb upstream 2.0kb upstream 2000 false Chr11: 35485773-35487772 Eucalyptus grandis
Eucgr.K02815 2.0kb downstream 2.0kb downstream 5066 true Chr11: 35487773-35492838 Eucalyptus grandis
Eucgr.K02815 2.0kb downstream 2.0kb downstream 2000 false Chr11: 35490839-35492838 Eucalyptus grandis
Eucgr.K02815 5.0kb upstream 5.0kb upstream 8066 true Chr11: 35482773-35490838 Eucalyptus grandis
Eucgr.K02815 5.0kb upstream 5.0kb upstream 5000 false Chr11: 35482773-35487772 Eucalyptus grandis
Eucgr.K02815 5.0kb downstream 5.0kb downstream 8066 true Chr11: 35487773-35495838 Eucalyptus grandis
Eucgr.K02815 5.0kb downstream 5.0kb downstream 5000 false Chr11: 35490839-35495838 Eucalyptus grandis
Eucgr.K02815 10.0kb upstream 10.0kb upstream 13066 true Chr11: 35477773-35490838 Eucalyptus grandis
Eucgr.K02815 10.0kb upstream 10.0kb upstream 10000 false Chr11: 35477773-35487772 Eucalyptus grandis
Eucgr.K02815 10.0kb downstream 10.0kb downstream 13066 true Chr11: 35487773-35500838 Eucalyptus grandis
Eucgr.K02815 10.0kb downstream 10.0kb downstream 10000 false Chr11: 35490839-35500838 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064141 5270 Rosid View MSA
123748222 5271 Pentapetalae View MSA
122791210 5272 Eudicot View MSA
122047587 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121310767 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.74746 0.0 10.1253    
cufflinks 12.286 0.0 28.4733   High
cufflinks 2.57294 0.0 7.19603    
cufflinks 10.7112 0.0 25.2474   High
cufflinks 1.64736 0.0 5.00758    
cufflinks 0.528001 0.0 1.96293 Low Low

0 Strain