Gene : Eucgr.K02783 E. grandis v2.0
Defline:  (1 of 1) 2.5.1.72 - Quinolinate synthase / Quinolinate synthetase Genomic Order:  2291
Name:  ? Eucgr.K02783 Secondary Identifier:  ? PAC:32069327
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PYRIDNUCSYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02783 0.5kb upstream 0.5kb upstream 5890 true Chr11: 35249058-35254947 Eucalyptus grandis
Eucgr.K02783 0.5kb upstream 0.5kb upstream 500 false Chr11: 35249058-35249557 Eucalyptus grandis
Eucgr.K02783 0.5kb downstream 0.5kb downstream 5890 true Chr11: 35249558-35255447 Eucalyptus grandis
Eucgr.K02783 0.5kb downstream 0.5kb downstream 500 false Chr11: 35254948-35255447 Eucalyptus grandis
Eucgr.K02783 1.0kb upstream 1.0kb upstream 6390 true Chr11: 35248558-35254947 Eucalyptus grandis
Eucgr.K02783 1.0kb upstream 1.0kb upstream 1000 false Chr11: 35248558-35249557 Eucalyptus grandis
Eucgr.K02783 1.0kb downstream 1.0kb downstream 6390 true Chr11: 35249558-35255947 Eucalyptus grandis
Eucgr.K02783 1.0kb downstream 1.0kb downstream 1000 false Chr11: 35254948-35255947 Eucalyptus grandis
Eucgr.K02783 2.0kb upstream 2.0kb upstream 7390 true Chr11: 35247558-35254947 Eucalyptus grandis
Eucgr.K02783 2.0kb upstream 2.0kb upstream 2000 false Chr11: 35247558-35249557 Eucalyptus grandis
Eucgr.K02783 2.0kb downstream 2.0kb downstream 7390 true Chr11: 35249558-35256947 Eucalyptus grandis
Eucgr.K02783 2.0kb downstream 2.0kb downstream 2000 false Chr11: 35254948-35256947 Eucalyptus grandis
Eucgr.K02783 5.0kb upstream 5.0kb upstream 10390 true Chr11: 35244558-35254947 Eucalyptus grandis
Eucgr.K02783 5.0kb upstream 5.0kb upstream 5000 false Chr11: 35244558-35249557 Eucalyptus grandis
Eucgr.K02783 5.0kb downstream 5.0kb downstream 10390 true Chr11: 35249558-35259947 Eucalyptus grandis
Eucgr.K02783 5.0kb downstream 5.0kb downstream 5000 false Chr11: 35254948-35259947 Eucalyptus grandis
Eucgr.K02783 10.0kb upstream 10.0kb upstream 15390 true Chr11: 35239558-35254947 Eucalyptus grandis
Eucgr.K02783 10.0kb upstream 10.0kb upstream 10000 false Chr11: 35239558-35249557 Eucalyptus grandis
Eucgr.K02783 10.0kb downstream 10.0kb downstream 15390 true Chr11: 35249558-35264947 Eucalyptus grandis
Eucgr.K02783 10.0kb downstream 10.0kb downstream 10000 false Chr11: 35254948-35264947 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063584 5270 Rosid View MSA
123753415 5271 Pentapetalae View MSA
122792816 5272 Eudicot View MSA
122044938 5273 Angiosperm View MSA
121346502 5274 Embryophyte View MSA
123424432 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0244 0.0 24.6117    
cufflinks 5.42429 0.0 12.5885   Low
cufflinks 14.6828 0.0 32.5218   High
cufflinks 9.12235 0.0 20.4456    
cufflinks 4.72602 0.0 11.1028   Low
cufflinks 11.325 0.0 25.2848    

0 Strain