Gene : Eucgr.K02798 E. grandis v2.0
Defline:  (1 of 4) 3.2.1.52 - Beta-N-acetylhexosaminidase / N-acetyl-beta-glucosaminidase Genomic Order:  2305
Name:  ? Eucgr.K02798 Secondary Identifier:  ? PAC:32065970
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6902 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02798 0.5kb upstream 0.5kb upstream 5713 true Chr11: 35370444-35376156 Eucalyptus grandis
Eucgr.K02798 0.5kb upstream 0.5kb upstream 500 false Chr11: 35375657-35376156 Eucalyptus grandis
Eucgr.K02798 0.5kb downstream 0.5kb downstream 5713 true Chr11: 35369944-35375656 Eucalyptus grandis
Eucgr.K02798 0.5kb downstream 0.5kb downstream 500 false Chr11: 35369944-35370443 Eucalyptus grandis
Eucgr.K02798 1.0kb upstream 1.0kb upstream 6213 true Chr11: 35370444-35376656 Eucalyptus grandis
Eucgr.K02798 1.0kb upstream 1.0kb upstream 1000 false Chr11: 35375657-35376656 Eucalyptus grandis
Eucgr.K02798 1.0kb downstream 1.0kb downstream 6213 true Chr11: 35369444-35375656 Eucalyptus grandis
Eucgr.K02798 1.0kb downstream 1.0kb downstream 1000 false Chr11: 35369444-35370443 Eucalyptus grandis
Eucgr.K02798 2.0kb upstream 2.0kb upstream 7213 true Chr11: 35370444-35377656 Eucalyptus grandis
Eucgr.K02798 2.0kb upstream 2.0kb upstream 2000 false Chr11: 35375657-35377656 Eucalyptus grandis
Eucgr.K02798 2.0kb downstream 2.0kb downstream 7213 true Chr11: 35368444-35375656 Eucalyptus grandis
Eucgr.K02798 2.0kb downstream 2.0kb downstream 2000 false Chr11: 35368444-35370443 Eucalyptus grandis
Eucgr.K02798 5.0kb upstream 5.0kb upstream 10213 true Chr11: 35370444-35380656 Eucalyptus grandis
Eucgr.K02798 5.0kb upstream 5.0kb upstream 5000 false Chr11: 35375657-35380656 Eucalyptus grandis
Eucgr.K02798 5.0kb downstream 5.0kb downstream 10213 true Chr11: 35365444-35375656 Eucalyptus grandis
Eucgr.K02798 5.0kb downstream 5.0kb downstream 5000 false Chr11: 35365444-35370443 Eucalyptus grandis
Eucgr.K02798 10.0kb upstream 10.0kb upstream 15213 true Chr11: 35370444-35385656 Eucalyptus grandis
Eucgr.K02798 10.0kb upstream 10.0kb upstream 10000 false Chr11: 35375657-35385656 Eucalyptus grandis
Eucgr.K02798 10.0kb downstream 10.0kb downstream 15213 true Chr11: 35360444-35375656 Eucalyptus grandis
Eucgr.K02798 10.0kb downstream 10.0kb downstream 10000 false Chr11: 35360444-35370443 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063455 5270 Rosid View MSA
123738859 5271 Pentapetalae View MSA
122789804 5272 Eudicot View MSA
122047899 5273 Angiosperm View MSA
121347698 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9878 0.0 35.8203    
cufflinks 10.4096 0.0 28.6306    
cufflinks 15.6179 0.0 35.21    
cufflinks 7.19621 0.0 17.5608    
cufflinks 23.1027 0.0 52.5405   High
cufflinks 5.95573 0.0 13.9614   Low

0 Strain