Gene : Eucgr.K02797 E. grandis v2.0
Defline:  (1 of 1) 3.4.24.34 - Neutrophil collagenase / Matrix metalloproteinase 8 Genomic Order:  2304
Name:  ? Eucgr.K02797 Secondary Identifier:  ? PAC:32069045
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02797 0.5kb upstream 0.5kb upstream 1683 true Chr11: 35366714-35368396 Eucalyptus grandis
Eucgr.K02797 0.5kb upstream 0.5kb upstream 500 false Chr11: 35367897-35368396 Eucalyptus grandis
Eucgr.K02797 0.5kb downstream 0.5kb downstream 1683 true Chr11: 35366214-35367896 Eucalyptus grandis
Eucgr.K02797 0.5kb downstream 0.5kb downstream 500 false Chr11: 35366214-35366713 Eucalyptus grandis
Eucgr.K02797 1.0kb upstream 1.0kb upstream 2183 true Chr11: 35366714-35368896 Eucalyptus grandis
Eucgr.K02797 1.0kb upstream 1.0kb upstream 1000 false Chr11: 35367897-35368896 Eucalyptus grandis
Eucgr.K02797 1.0kb downstream 1.0kb downstream 2183 true Chr11: 35365714-35367896 Eucalyptus grandis
Eucgr.K02797 1.0kb downstream 1.0kb downstream 1000 false Chr11: 35365714-35366713 Eucalyptus grandis
Eucgr.K02797 2.0kb upstream 2.0kb upstream 3183 true Chr11: 35366714-35369896 Eucalyptus grandis
Eucgr.K02797 2.0kb upstream 2.0kb upstream 2000 false Chr11: 35367897-35369896 Eucalyptus grandis
Eucgr.K02797 2.0kb downstream 2.0kb downstream 3183 true Chr11: 35364714-35367896 Eucalyptus grandis
Eucgr.K02797 2.0kb downstream 2.0kb downstream 2000 false Chr11: 35364714-35366713 Eucalyptus grandis
Eucgr.K02797 5.0kb upstream 5.0kb upstream 6183 true Chr11: 35366714-35372896 Eucalyptus grandis
Eucgr.K02797 5.0kb upstream 5.0kb upstream 5000 false Chr11: 35367897-35372896 Eucalyptus grandis
Eucgr.K02797 5.0kb downstream 5.0kb downstream 6183 true Chr11: 35361714-35367896 Eucalyptus grandis
Eucgr.K02797 5.0kb downstream 5.0kb downstream 5000 false Chr11: 35361714-35366713 Eucalyptus grandis
Eucgr.K02797 10.0kb upstream 10.0kb upstream 11183 true Chr11: 35366714-35377896 Eucalyptus grandis
Eucgr.K02797 10.0kb upstream 10.0kb upstream 10000 false Chr11: 35367897-35377896 Eucalyptus grandis
Eucgr.K02797 10.0kb downstream 10.0kb downstream 11183 true Chr11: 35356714-35367896 Eucalyptus grandis
Eucgr.K02797 10.0kb downstream 10.0kb downstream 10000 false Chr11: 35356714-35366713 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026255 5273 Angiosperm View MSA
124073759 5270 Rosid View MSA
123750653 5271 Pentapetalae View MSA
122795756 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.427358 0.0 1.45971    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain