Gene : Eucgr.K03581 E. grandis v2.0
Defline:  (1 of 2) PTHR23023:SF83 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA5-RELATED Genomic Order:  3005
Name:  ? Eucgr.K03581 Secondary Identifier:  ? PAC:32067332
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWYDQC-4 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03581 0.5kb upstream 0.5kb upstream 2124 true Chr11: 44303293-44305416 Eucalyptus grandis
Eucgr.K03581 0.5kb upstream 0.5kb upstream 500 false Chr11: 44303293-44303792 Eucalyptus grandis
Eucgr.K03581 0.5kb downstream 0.5kb downstream 2124 true Chr11: 44303793-44305916 Eucalyptus grandis
Eucgr.K03581 0.5kb downstream 0.5kb downstream 500 false Chr11: 44305417-44305916 Eucalyptus grandis
Eucgr.K03581 1.0kb upstream 1.0kb upstream 2624 true Chr11: 44302793-44305416 Eucalyptus grandis
Eucgr.K03581 1.0kb upstream 1.0kb upstream 1000 false Chr11: 44302793-44303792 Eucalyptus grandis
Eucgr.K03581 1.0kb downstream 1.0kb downstream 2624 true Chr11: 44303793-44306416 Eucalyptus grandis
Eucgr.K03581 1.0kb downstream 1.0kb downstream 1000 false Chr11: 44305417-44306416 Eucalyptus grandis
Eucgr.K03581 2.0kb upstream 2.0kb upstream 3624 true Chr11: 44301793-44305416 Eucalyptus grandis
Eucgr.K03581 2.0kb upstream 2.0kb upstream 2000 false Chr11: 44301793-44303792 Eucalyptus grandis
Eucgr.K03581 2.0kb downstream 2.0kb downstream 3624 true Chr11: 44303793-44307416 Eucalyptus grandis
Eucgr.K03581 2.0kb downstream 2.0kb downstream 2000 false Chr11: 44305417-44307416 Eucalyptus grandis
Eucgr.K03581 5.0kb upstream 5.0kb upstream 6624 true Chr11: 44298793-44305416 Eucalyptus grandis
Eucgr.K03581 5.0kb upstream 5.0kb upstream 5000 false Chr11: 44298793-44303792 Eucalyptus grandis
Eucgr.K03581 5.0kb downstream 5.0kb downstream 6624 true Chr11: 44303793-44310416 Eucalyptus grandis
Eucgr.K03581 5.0kb downstream 5.0kb downstream 5000 false Chr11: 44305417-44310416 Eucalyptus grandis
Eucgr.K03581 10.0kb upstream 10.0kb upstream 11624 true Chr11: 44293793-44305416 Eucalyptus grandis
Eucgr.K03581 10.0kb upstream 10.0kb upstream 10000 false Chr11: 44293793-44303792 Eucalyptus grandis
Eucgr.K03581 10.0kb downstream 10.0kb downstream 11624 true Chr11: 44303793-44315416 Eucalyptus grandis
Eucgr.K03581 10.0kb downstream 10.0kb downstream 10000 false Chr11: 44305417-44315416 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062448 5270 Rosid View MSA
123751619 5271 Pentapetalae View MSA
122797534 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain