Gene : Eucgr.K03533 E. grandis v2.0
Defline:  (1 of 3) PTHR23241//PTHR23241:SF55 - LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATED Genomic Order:  2961
Name:  ? Eucgr.K03533 Secondary Identifier:  ? PAC:32067070
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03533 0.5kb upstream 0.5kb upstream 3087 true Chr11: 43807703-43810789 Eucalyptus grandis
Eucgr.K03533 0.5kb upstream 0.5kb upstream 500 false Chr11: 43810290-43810789 Eucalyptus grandis
Eucgr.K03533 0.5kb downstream 0.5kb downstream 3087 true Chr11: 43807203-43810289 Eucalyptus grandis
Eucgr.K03533 0.5kb downstream 0.5kb downstream 500 false Chr11: 43807203-43807702 Eucalyptus grandis
Eucgr.K03533 1.0kb upstream 1.0kb upstream 3587 true Chr11: 43807703-43811289 Eucalyptus grandis
Eucgr.K03533 1.0kb upstream 1.0kb upstream 1000 false Chr11: 43810290-43811289 Eucalyptus grandis
Eucgr.K03533 1.0kb downstream 1.0kb downstream 3587 true Chr11: 43806703-43810289 Eucalyptus grandis
Eucgr.K03533 1.0kb downstream 1.0kb downstream 1000 false Chr11: 43806703-43807702 Eucalyptus grandis
Eucgr.K03533 2.0kb upstream 2.0kb upstream 4587 true Chr11: 43807703-43812289 Eucalyptus grandis
Eucgr.K03533 2.0kb upstream 2.0kb upstream 2000 false Chr11: 43810290-43812289 Eucalyptus grandis
Eucgr.K03533 2.0kb downstream 2.0kb downstream 4587 true Chr11: 43805703-43810289 Eucalyptus grandis
Eucgr.K03533 2.0kb downstream 2.0kb downstream 2000 false Chr11: 43805703-43807702 Eucalyptus grandis
Eucgr.K03533 5.0kb upstream 5.0kb upstream 7587 true Chr11: 43807703-43815289 Eucalyptus grandis
Eucgr.K03533 5.0kb upstream 5.0kb upstream 5000 false Chr11: 43810290-43815289 Eucalyptus grandis
Eucgr.K03533 5.0kb downstream 5.0kb downstream 7587 true Chr11: 43802703-43810289 Eucalyptus grandis
Eucgr.K03533 5.0kb downstream 5.0kb downstream 5000 false Chr11: 43802703-43807702 Eucalyptus grandis
Eucgr.K03533 10.0kb upstream 10.0kb upstream 12587 true Chr11: 43807703-43820289 Eucalyptus grandis
Eucgr.K03533 10.0kb upstream 10.0kb upstream 10000 false Chr11: 43810290-43820289 Eucalyptus grandis
Eucgr.K03533 10.0kb downstream 10.0kb downstream 12587 true Chr11: 43797703-43810289 Eucalyptus grandis
Eucgr.K03533 10.0kb downstream 10.0kb downstream 10000 false Chr11: 43797703-43807702 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065364 5270 Rosid View MSA
123740028 5271 Pentapetalae View MSA
122787997 5272 Eudicot View MSA
122045721 5273 Angiosperm View MSA
121349691 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 63.5045 0.0 143.639 High  
cufflinks 81.9172 0.0 188.884 High  
cufflinks 59.4663 0.0 133.736 High  
cufflinks 59.9969 0.0 149.216 High  
cufflinks 31.0947 0.0 71.1306   Low
cufflinks 76.2362 0.0 174.339 High  

0 Strain