Gene : Eucgr.K03534 E. grandis v2.0
Defline:  (1 of 3) PTHR23241//PTHR23241:SF55 - LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATED Genomic Order:  2962
Name:  ? Eucgr.K03534 Secondary Identifier:  ? PAC:32068176
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03534 0.5kb upstream 0.5kb upstream 7730 true Chr11: 43815235-43822964 Eucalyptus grandis
Eucgr.K03534 0.5kb upstream 0.5kb upstream 500 false Chr11: 43822465-43822964 Eucalyptus grandis
Eucgr.K03534 0.5kb downstream 0.5kb downstream 7730 true Chr11: 43814735-43822464 Eucalyptus grandis
Eucgr.K03534 0.5kb downstream 0.5kb downstream 500 false Chr11: 43814735-43815234 Eucalyptus grandis
Eucgr.K03534 1.0kb upstream 1.0kb upstream 8230 true Chr11: 43815235-43823464 Eucalyptus grandis
Eucgr.K03534 1.0kb upstream 1.0kb upstream 1000 false Chr11: 43822465-43823464 Eucalyptus grandis
Eucgr.K03534 1.0kb downstream 1.0kb downstream 8230 true Chr11: 43814235-43822464 Eucalyptus grandis
Eucgr.K03534 1.0kb downstream 1.0kb downstream 1000 false Chr11: 43814235-43815234 Eucalyptus grandis
Eucgr.K03534 2.0kb upstream 2.0kb upstream 9230 true Chr11: 43815235-43824464 Eucalyptus grandis
Eucgr.K03534 2.0kb upstream 2.0kb upstream 2000 false Chr11: 43822465-43824464 Eucalyptus grandis
Eucgr.K03534 2.0kb downstream 2.0kb downstream 9230 true Chr11: 43813235-43822464 Eucalyptus grandis
Eucgr.K03534 2.0kb downstream 2.0kb downstream 2000 false Chr11: 43813235-43815234 Eucalyptus grandis
Eucgr.K03534 5.0kb upstream 5.0kb upstream 12230 true Chr11: 43815235-43827464 Eucalyptus grandis
Eucgr.K03534 5.0kb upstream 5.0kb upstream 5000 false Chr11: 43822465-43827464 Eucalyptus grandis
Eucgr.K03534 5.0kb downstream 5.0kb downstream 12230 true Chr11: 43810235-43822464 Eucalyptus grandis
Eucgr.K03534 5.0kb downstream 5.0kb downstream 5000 false Chr11: 43810235-43815234 Eucalyptus grandis
Eucgr.K03534 10.0kb upstream 10.0kb upstream 17230 true Chr11: 43815235-43832464 Eucalyptus grandis
Eucgr.K03534 10.0kb upstream 10.0kb upstream 10000 false Chr11: 43822465-43832464 Eucalyptus grandis
Eucgr.K03534 10.0kb downstream 10.0kb downstream 17230 true Chr11: 43805235-43822464 Eucalyptus grandis
Eucgr.K03534 10.0kb downstream 10.0kb downstream 10000 false Chr11: 43805235-43815234 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065364 5270 Rosid View MSA
123740028 5271 Pentapetalae View MSA
122787997 5272 Eudicot View MSA
122045721 5273 Angiosperm View MSA
121349691 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.90423 0.0 5.6474    
cufflinks 0.944442 0.0 3.04059   Low
cufflinks 1.84836 0.0 5.49343    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.01899 0.0 5.96932    

0 Strain