Gene : Eucgr.K03488 E. grandis v2.0
Defline:  (1 of 2) PTHR11878 - SODIUM/CALCIUM EXCHANGER Genomic Order:  2922
Name:  ? Eucgr.K03488 Secondary Identifier:  ? PAC:32069318
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03488 0.5kb upstream 0.5kb upstream 8473 true Chr11: 43336966-43345438 Eucalyptus grandis
Eucgr.K03488 0.5kb upstream 0.5kb upstream 500 false Chr11: 43336966-43337465 Eucalyptus grandis
Eucgr.K03488 0.5kb downstream 0.5kb downstream 8473 true Chr11: 43337466-43345938 Eucalyptus grandis
Eucgr.K03488 0.5kb downstream 0.5kb downstream 500 false Chr11: 43345439-43345938 Eucalyptus grandis
Eucgr.K03488 1.0kb upstream 1.0kb upstream 8973 true Chr11: 43336466-43345438 Eucalyptus grandis
Eucgr.K03488 1.0kb upstream 1.0kb upstream 1000 false Chr11: 43336466-43337465 Eucalyptus grandis
Eucgr.K03488 1.0kb downstream 1.0kb downstream 8973 true Chr11: 43337466-43346438 Eucalyptus grandis
Eucgr.K03488 1.0kb downstream 1.0kb downstream 1000 false Chr11: 43345439-43346438 Eucalyptus grandis
Eucgr.K03488 2.0kb upstream 2.0kb upstream 9973 true Chr11: 43335466-43345438 Eucalyptus grandis
Eucgr.K03488 2.0kb upstream 2.0kb upstream 2000 false Chr11: 43335466-43337465 Eucalyptus grandis
Eucgr.K03488 2.0kb downstream 2.0kb downstream 9973 true Chr11: 43337466-43347438 Eucalyptus grandis
Eucgr.K03488 2.0kb downstream 2.0kb downstream 2000 false Chr11: 43345439-43347438 Eucalyptus grandis
Eucgr.K03488 5.0kb upstream 5.0kb upstream 12973 true Chr11: 43332466-43345438 Eucalyptus grandis
Eucgr.K03488 5.0kb upstream 5.0kb upstream 5000 false Chr11: 43332466-43337465 Eucalyptus grandis
Eucgr.K03488 5.0kb downstream 5.0kb downstream 12973 true Chr11: 43337466-43350438 Eucalyptus grandis
Eucgr.K03488 5.0kb downstream 5.0kb downstream 5000 false Chr11: 43345439-43350438 Eucalyptus grandis
Eucgr.K03488 10.0kb upstream 10.0kb upstream 17973 true Chr11: 43327466-43345438 Eucalyptus grandis
Eucgr.K03488 10.0kb upstream 10.0kb upstream 10000 false Chr11: 43327466-43337465 Eucalyptus grandis
Eucgr.K03488 10.0kb downstream 10.0kb downstream 17973 true Chr11: 43337466-43355438 Eucalyptus grandis
Eucgr.K03488 10.0kb downstream 10.0kb downstream 10000 false Chr11: 43345439-43355438 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026222 5273 Angiosperm View MSA
124062235 5270 Rosid View MSA
123741158 5271 Pentapetalae View MSA
122792676 5272 Eudicot View MSA
121347754 5274 Embryophyte View MSA
123427764 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.333887 0.0 1.07493 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.85348 0.0 4.93446    
cufflinks 2.39253 0.0 6.24143    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain