Gene : Eucgr.K03490 E. grandis v2.0
Defline:  (1 of 1) PTHR14150 - U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 Genomic Order:  2924
Name:  ? Eucgr.K03490 Secondary Identifier:  ? PAC:32067935
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03490 0.5kb upstream 0.5kb upstream 5913 true Chr11: 43355011-43360923 Eucalyptus grandis
Eucgr.K03490 0.5kb upstream 0.5kb upstream 500 false Chr11: 43360424-43360923 Eucalyptus grandis
Eucgr.K03490 0.5kb downstream 0.5kb downstream 5913 true Chr11: 43354511-43360423 Eucalyptus grandis
Eucgr.K03490 0.5kb downstream 0.5kb downstream 500 false Chr11: 43354511-43355010 Eucalyptus grandis
Eucgr.K03490 1.0kb upstream 1.0kb upstream 6413 true Chr11: 43355011-43361423 Eucalyptus grandis
Eucgr.K03490 1.0kb upstream 1.0kb upstream 1000 false Chr11: 43360424-43361423 Eucalyptus grandis
Eucgr.K03490 1.0kb downstream 1.0kb downstream 6413 true Chr11: 43354011-43360423 Eucalyptus grandis
Eucgr.K03490 1.0kb downstream 1.0kb downstream 1000 false Chr11: 43354011-43355010 Eucalyptus grandis
Eucgr.K03490 2.0kb upstream 2.0kb upstream 7413 true Chr11: 43355011-43362423 Eucalyptus grandis
Eucgr.K03490 2.0kb upstream 2.0kb upstream 2000 false Chr11: 43360424-43362423 Eucalyptus grandis
Eucgr.K03490 2.0kb downstream 2.0kb downstream 7413 true Chr11: 43353011-43360423 Eucalyptus grandis
Eucgr.K03490 2.0kb downstream 2.0kb downstream 2000 false Chr11: 43353011-43355010 Eucalyptus grandis
Eucgr.K03490 5.0kb upstream 5.0kb upstream 10413 true Chr11: 43355011-43365423 Eucalyptus grandis
Eucgr.K03490 5.0kb upstream 5.0kb upstream 5000 false Chr11: 43360424-43365423 Eucalyptus grandis
Eucgr.K03490 5.0kb downstream 5.0kb downstream 10413 true Chr11: 43350011-43360423 Eucalyptus grandis
Eucgr.K03490 5.0kb downstream 5.0kb downstream 5000 false Chr11: 43350011-43355010 Eucalyptus grandis
Eucgr.K03490 10.0kb upstream 10.0kb upstream 15413 true Chr11: 43355011-43370423 Eucalyptus grandis
Eucgr.K03490 10.0kb upstream 10.0kb upstream 10000 false Chr11: 43360424-43370423 Eucalyptus grandis
Eucgr.K03490 10.0kb downstream 10.0kb downstream 15413 true Chr11: 43345011-43360423 Eucalyptus grandis
Eucgr.K03490 10.0kb downstream 10.0kb downstream 10000 false Chr11: 43345011-43355010 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066027 5270 Rosid View MSA
123741569 5271 Pentapetalae View MSA
122789382 5272 Eudicot View MSA
122043501 5273 Angiosperm View MSA
121349819 5274 Embryophyte View MSA
123425174 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3867 0.0 25.5355    
cufflinks 12.1243 0.0 27.2079    
cufflinks 13.2421 0.0 29.9201    
cufflinks 8.24708 0.0 18.5847    
cufflinks 13.5052 0.0 30.6388    
cufflinks 6.73563 0.0 15.4808   Low

0 Strain