Gene : Eucgr.K03468 E. grandis v2.0
Defline:  (1 of 1) KOG1188 - WD40 repeat protein Genomic Order:  2902
Name:  ? Eucgr.K03468 Secondary Identifier:  ? PAC:32065870
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03468 0.5kb upstream 0.5kb upstream 4759 true Chr11: 43095220-43099978 Eucalyptus grandis
Eucgr.K03468 0.5kb upstream 0.5kb upstream 500 false Chr11: 43099479-43099978 Eucalyptus grandis
Eucgr.K03468 0.5kb downstream 0.5kb downstream 4759 true Chr11: 43094720-43099478 Eucalyptus grandis
Eucgr.K03468 0.5kb downstream 0.5kb downstream 500 false Chr11: 43094720-43095219 Eucalyptus grandis
Eucgr.K03468 1.0kb upstream 1.0kb upstream 5259 true Chr11: 43095220-43100478 Eucalyptus grandis
Eucgr.K03468 1.0kb upstream 1.0kb upstream 1000 false Chr11: 43099479-43100478 Eucalyptus grandis
Eucgr.K03468 1.0kb downstream 1.0kb downstream 5259 true Chr11: 43094220-43099478 Eucalyptus grandis
Eucgr.K03468 1.0kb downstream 1.0kb downstream 1000 false Chr11: 43094220-43095219 Eucalyptus grandis
Eucgr.K03468 2.0kb upstream 2.0kb upstream 6259 true Chr11: 43095220-43101478 Eucalyptus grandis
Eucgr.K03468 2.0kb upstream 2.0kb upstream 2000 false Chr11: 43099479-43101478 Eucalyptus grandis
Eucgr.K03468 2.0kb downstream 2.0kb downstream 6259 true Chr11: 43093220-43099478 Eucalyptus grandis
Eucgr.K03468 2.0kb downstream 2.0kb downstream 2000 false Chr11: 43093220-43095219 Eucalyptus grandis
Eucgr.K03468 5.0kb upstream 5.0kb upstream 9259 true Chr11: 43095220-43104478 Eucalyptus grandis
Eucgr.K03468 5.0kb upstream 5.0kb upstream 5000 false Chr11: 43099479-43104478 Eucalyptus grandis
Eucgr.K03468 5.0kb downstream 5.0kb downstream 9259 true Chr11: 43090220-43099478 Eucalyptus grandis
Eucgr.K03468 5.0kb downstream 5.0kb downstream 5000 false Chr11: 43090220-43095219 Eucalyptus grandis
Eucgr.K03468 10.0kb upstream 10.0kb upstream 14259 true Chr11: 43095220-43109478 Eucalyptus grandis
Eucgr.K03468 10.0kb upstream 10.0kb upstream 10000 false Chr11: 43099479-43109478 Eucalyptus grandis
Eucgr.K03468 10.0kb downstream 10.0kb downstream 14259 true Chr11: 43085220-43099478 Eucalyptus grandis
Eucgr.K03468 10.0kb downstream 10.0kb downstream 10000 false Chr11: 43085220-43095219 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068228 5270 Rosid View MSA
123738584 5271 Pentapetalae View MSA
122788680 5272 Eudicot View MSA
122044076 5273 Angiosperm View MSA
121344334 5274 Embryophyte View MSA
123425104 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.41371 0.0 19.7328    
cufflinks 8.75332 0.0 20.3879    
cufflinks 6.73331 0.0 16.0867   Low
cufflinks 8.88171 0.0 20.6473    
cufflinks 10.1761 0.0 23.438    
cufflinks 10.7233 0.0 24.7101   High

0 Strain