Gene : Eucgr.K03389 E. grandis v2.0
Defline:  (1 of 2) PTHR11592:SF17 - GLUTATHIONE PEROXIDASE 4-RELATED Genomic Order:  2828
Name:  ? Eucgr.K03389 Secondary Identifier:  ? PAC:32069356
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis DETOX1-PWY-1 Eucalyptus grandis pathologic  
Egrandis PWY-4081 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03389 0.5kb upstream 0.5kb upstream 3437 true Chr11: 42100559-42103995 Eucalyptus grandis
Eucgr.K03389 0.5kb upstream 0.5kb upstream 500 false Chr11: 42103496-42103995 Eucalyptus grandis
Eucgr.K03389 0.5kb downstream 0.5kb downstream 3437 true Chr11: 42100059-42103495 Eucalyptus grandis
Eucgr.K03389 0.5kb downstream 0.5kb downstream 500 false Chr11: 42100059-42100558 Eucalyptus grandis
Eucgr.K03389 1.0kb upstream 1.0kb upstream 3937 true Chr11: 42100559-42104495 Eucalyptus grandis
Eucgr.K03389 1.0kb upstream 1.0kb upstream 1000 false Chr11: 42103496-42104495 Eucalyptus grandis
Eucgr.K03389 1.0kb downstream 1.0kb downstream 3937 true Chr11: 42099559-42103495 Eucalyptus grandis
Eucgr.K03389 1.0kb downstream 1.0kb downstream 1000 false Chr11: 42099559-42100558 Eucalyptus grandis
Eucgr.K03389 2.0kb upstream 2.0kb upstream 4937 true Chr11: 42100559-42105495 Eucalyptus grandis
Eucgr.K03389 2.0kb upstream 2.0kb upstream 2000 false Chr11: 42103496-42105495 Eucalyptus grandis
Eucgr.K03389 2.0kb downstream 2.0kb downstream 4937 true Chr11: 42098559-42103495 Eucalyptus grandis
Eucgr.K03389 2.0kb downstream 2.0kb downstream 2000 false Chr11: 42098559-42100558 Eucalyptus grandis
Eucgr.K03389 5.0kb upstream 5.0kb upstream 7937 true Chr11: 42100559-42108495 Eucalyptus grandis
Eucgr.K03389 5.0kb upstream 5.0kb upstream 5000 false Chr11: 42103496-42108495 Eucalyptus grandis
Eucgr.K03389 5.0kb downstream 5.0kb downstream 7937 true Chr11: 42095559-42103495 Eucalyptus grandis
Eucgr.K03389 5.0kb downstream 5.0kb downstream 5000 false Chr11: 42095559-42100558 Eucalyptus grandis
Eucgr.K03389 10.0kb upstream 10.0kb upstream 12937 true Chr11: 42100559-42113495 Eucalyptus grandis
Eucgr.K03389 10.0kb upstream 10.0kb upstream 10000 false Chr11: 42103496-42113495 Eucalyptus grandis
Eucgr.K03389 10.0kb downstream 10.0kb downstream 12937 true Chr11: 42090559-42103495 Eucalyptus grandis
Eucgr.K03389 10.0kb downstream 10.0kb downstream 10000 false Chr11: 42090559-42100558 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026200 5273 Angiosperm View MSA
124065058 5270 Rosid View MSA
123743608 5271 Pentapetalae View MSA
122796492 5272 Eudicot View MSA
121296225 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.7428 0.0 53.3687    
cufflinks 16.292 0.0 37.2589   Low
cufflinks 22.3955 0.0 50.4081    
cufflinks 28.8316 0.0 64.1915    
cufflinks 37.7466 0.0 83.5927 High High
cufflinks 17.1499 0.0 39.519    

0 Strain