Gene : Eucgr.K03403 E. grandis v2.0
Defline:  (1 of 1) PTHR13829 - SNRNP CORE PROTEIN FAMILY MEMBER Genomic Order:  2840
Name:  ? Eucgr.K03403 Secondary Identifier:  ? PAC:32066037
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03403 0.5kb upstream 0.5kb upstream 2303 true Chr11: 42361161-42363463 Eucalyptus grandis
Eucgr.K03403 0.5kb upstream 0.5kb upstream 500 false Chr11: 42362964-42363463 Eucalyptus grandis
Eucgr.K03403 0.5kb downstream 0.5kb downstream 2303 true Chr11: 42360661-42362963 Eucalyptus grandis
Eucgr.K03403 0.5kb downstream 0.5kb downstream 500 false Chr11: 42360661-42361160 Eucalyptus grandis
Eucgr.K03403 1.0kb upstream 1.0kb upstream 2803 true Chr11: 42361161-42363963 Eucalyptus grandis
Eucgr.K03403 1.0kb upstream 1.0kb upstream 1000 false Chr11: 42362964-42363963 Eucalyptus grandis
Eucgr.K03403 1.0kb downstream 1.0kb downstream 2803 true Chr11: 42360161-42362963 Eucalyptus grandis
Eucgr.K03403 1.0kb downstream 1.0kb downstream 1000 false Chr11: 42360161-42361160 Eucalyptus grandis
Eucgr.K03403 2.0kb upstream 2.0kb upstream 3803 true Chr11: 42361161-42364963 Eucalyptus grandis
Eucgr.K03403 2.0kb upstream 2.0kb upstream 2000 false Chr11: 42362964-42364963 Eucalyptus grandis
Eucgr.K03403 2.0kb downstream 2.0kb downstream 3803 true Chr11: 42359161-42362963 Eucalyptus grandis
Eucgr.K03403 2.0kb downstream 2.0kb downstream 2000 false Chr11: 42359161-42361160 Eucalyptus grandis
Eucgr.K03403 5.0kb upstream 5.0kb upstream 6803 true Chr11: 42361161-42367963 Eucalyptus grandis
Eucgr.K03403 5.0kb upstream 5.0kb upstream 5000 false Chr11: 42362964-42367963 Eucalyptus grandis
Eucgr.K03403 5.0kb downstream 5.0kb downstream 6803 true Chr11: 42356161-42362963 Eucalyptus grandis
Eucgr.K03403 5.0kb downstream 5.0kb downstream 5000 false Chr11: 42356161-42361160 Eucalyptus grandis
Eucgr.K03403 10.0kb upstream 10.0kb upstream 11803 true Chr11: 42361161-42372963 Eucalyptus grandis
Eucgr.K03403 10.0kb upstream 10.0kb upstream 10000 false Chr11: 42362964-42372963 Eucalyptus grandis
Eucgr.K03403 10.0kb downstream 10.0kb downstream 11803 true Chr11: 42351161-42362963 Eucalyptus grandis
Eucgr.K03403 10.0kb downstream 10.0kb downstream 10000 false Chr11: 42351161-42361160 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061118 5270 Rosid View MSA
123743245 5271 Pentapetalae View MSA
122795918 5272 Eudicot View MSA
122043046 5273 Angiosperm View MSA
121347447 5274 Embryophyte View MSA
123425045 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.4681 0.0 72.0624 High  
cufflinks 41.2241 0.0 92.6167    
cufflinks 26.2145 0.0 60.75 High  
cufflinks 44.1666 0.0 98.8658 High  
cufflinks 41.3632 0.0 93.0457 High  
cufflinks 14.2436 0.0 35.0891   Low

0 Strain