Gene : Eucgr.K03374 E. grandis v2.0
Defline:  (1 of 1) PTHR10906:SF2 - PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC Genomic Order:  2813
Name:  ? Eucgr.K03374 Secondary Identifier:  ? PAC:32067300
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03374 0.5kb upstream 0.5kb upstream 9509 true Chr11: 42004695-42014203 Eucalyptus grandis
Eucgr.K03374 0.5kb upstream 0.5kb upstream 500 false Chr11: 42004695-42005194 Eucalyptus grandis
Eucgr.K03374 0.5kb downstream 0.5kb downstream 9509 true Chr11: 42005195-42014703 Eucalyptus grandis
Eucgr.K03374 0.5kb downstream 0.5kb downstream 500 false Chr11: 42014204-42014703 Eucalyptus grandis
Eucgr.K03374 1.0kb upstream 1.0kb upstream 10009 true Chr11: 42004195-42014203 Eucalyptus grandis
Eucgr.K03374 1.0kb upstream 1.0kb upstream 1000 false Chr11: 42004195-42005194 Eucalyptus grandis
Eucgr.K03374 1.0kb downstream 1.0kb downstream 10009 true Chr11: 42005195-42015203 Eucalyptus grandis
Eucgr.K03374 1.0kb downstream 1.0kb downstream 1000 false Chr11: 42014204-42015203 Eucalyptus grandis
Eucgr.K03374 2.0kb upstream 2.0kb upstream 11009 true Chr11: 42003195-42014203 Eucalyptus grandis
Eucgr.K03374 2.0kb upstream 2.0kb upstream 2000 false Chr11: 42003195-42005194 Eucalyptus grandis
Eucgr.K03374 2.0kb downstream 2.0kb downstream 11009 true Chr11: 42005195-42016203 Eucalyptus grandis
Eucgr.K03374 2.0kb downstream 2.0kb downstream 2000 false Chr11: 42014204-42016203 Eucalyptus grandis
Eucgr.K03374 5.0kb upstream 5.0kb upstream 14009 true Chr11: 42000195-42014203 Eucalyptus grandis
Eucgr.K03374 5.0kb upstream 5.0kb upstream 5000 false Chr11: 42000195-42005194 Eucalyptus grandis
Eucgr.K03374 5.0kb downstream 5.0kb downstream 14009 true Chr11: 42005195-42019203 Eucalyptus grandis
Eucgr.K03374 5.0kb downstream 5.0kb downstream 5000 false Chr11: 42014204-42019203 Eucalyptus grandis
Eucgr.K03374 10.0kb upstream 10.0kb upstream 19009 true Chr11: 41995195-42014203 Eucalyptus grandis
Eucgr.K03374 10.0kb upstream 10.0kb upstream 10000 false Chr11: 41995195-42005194 Eucalyptus grandis
Eucgr.K03374 10.0kb downstream 10.0kb downstream 19009 true Chr11: 42005195-42024203 Eucalyptus grandis
Eucgr.K03374 10.0kb downstream 10.0kb downstream 10000 false Chr11: 42014204-42024203 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061743 5270 Rosid View MSA
123737795 5271 Pentapetalae View MSA
122790325 5272 Eudicot View MSA
122042778 5273 Angiosperm View MSA
121345832 5274 Embryophyte View MSA
123425781 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.64867 0.0 13.7726    
cufflinks 5.37105 0.0 13.0393    
cufflinks 4.33506 0.0 10.8088    
cufflinks 3.65144 0.0 9.21362    
cufflinks 2.45339 0.0 6.46537   Low
cufflinks 5.80569 0.0 14.1874    

0 Strain