Gene : Eucgr.K03299 E. grandis v2.0
Defline:  (1 of 1) PTHR22950//PTHR22950:SF279 - AMINO ACID TRANSPORTER Genomic Order:  2750
Name:  ? Eucgr.K03299 Secondary Identifier:  ? PAC:32067716
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03299 0.5kb upstream 0.5kb upstream 4176 true Chr11: 41357557-41361732 Eucalyptus grandis
Eucgr.K03299 0.5kb upstream 0.5kb upstream 500 false Chr11: 41357557-41358056 Eucalyptus grandis
Eucgr.K03299 0.5kb downstream 0.5kb downstream 4176 true Chr11: 41358057-41362232 Eucalyptus grandis
Eucgr.K03299 0.5kb downstream 0.5kb downstream 500 false Chr11: 41361733-41362232 Eucalyptus grandis
Eucgr.K03299 1.0kb upstream 1.0kb upstream 4676 true Chr11: 41357057-41361732 Eucalyptus grandis
Eucgr.K03299 1.0kb upstream 1.0kb upstream 1000 false Chr11: 41357057-41358056 Eucalyptus grandis
Eucgr.K03299 1.0kb downstream 1.0kb downstream 4676 true Chr11: 41358057-41362732 Eucalyptus grandis
Eucgr.K03299 1.0kb downstream 1.0kb downstream 1000 false Chr11: 41361733-41362732 Eucalyptus grandis
Eucgr.K03299 2.0kb upstream 2.0kb upstream 5676 true Chr11: 41356057-41361732 Eucalyptus grandis
Eucgr.K03299 2.0kb upstream 2.0kb upstream 2000 false Chr11: 41356057-41358056 Eucalyptus grandis
Eucgr.K03299 2.0kb downstream 2.0kb downstream 5676 true Chr11: 41358057-41363732 Eucalyptus grandis
Eucgr.K03299 2.0kb downstream 2.0kb downstream 2000 false Chr11: 41361733-41363732 Eucalyptus grandis
Eucgr.K03299 5.0kb upstream 5.0kb upstream 8676 true Chr11: 41353057-41361732 Eucalyptus grandis
Eucgr.K03299 5.0kb upstream 5.0kb upstream 5000 false Chr11: 41353057-41358056 Eucalyptus grandis
Eucgr.K03299 5.0kb downstream 5.0kb downstream 8676 true Chr11: 41358057-41366732 Eucalyptus grandis
Eucgr.K03299 5.0kb downstream 5.0kb downstream 5000 false Chr11: 41361733-41366732 Eucalyptus grandis
Eucgr.K03299 10.0kb upstream 10.0kb upstream 13676 true Chr11: 41348057-41361732 Eucalyptus grandis
Eucgr.K03299 10.0kb upstream 10.0kb upstream 10000 false Chr11: 41348057-41358056 Eucalyptus grandis
Eucgr.K03299 10.0kb downstream 10.0kb downstream 13676 true Chr11: 41358057-41371732 Eucalyptus grandis
Eucgr.K03299 10.0kb downstream 10.0kb downstream 10000 false Chr11: 41361733-41371732 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070405 5270 Rosid View MSA
123742306 5271 Pentapetalae View MSA
122770258 5272 Eudicot View MSA
122049335 5273 Angiosperm View MSA
123429000 5275 Viridiplantae View MSA
121348814 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.169215 0.0 0.63274 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.4197 0.0 1.39122    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.0457 0.0 3.0917   High

0 Strain