Gene : Eucgr.K03293 E. grandis v2.0
Defline:  (1 of 1) PTHR11514:SF53 - TRANSCRIPTION FACTOR BHLH3 Genomic Order:  2744
Name:  ? Eucgr.K03293 Secondary Identifier:  ? PAC:32067473
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03293 0.5kb upstream 0.5kb upstream 3150 true Chr11: 41263196-41266345 Eucalyptus grandis
Eucgr.K03293 0.5kb upstream 0.5kb upstream 500 false Chr11: 41265846-41266345 Eucalyptus grandis
Eucgr.K03293 0.5kb downstream 0.5kb downstream 3150 true Chr11: 41262696-41265845 Eucalyptus grandis
Eucgr.K03293 0.5kb downstream 0.5kb downstream 500 false Chr11: 41262696-41263195 Eucalyptus grandis
Eucgr.K03293 1.0kb upstream 1.0kb upstream 3650 true Chr11: 41263196-41266845 Eucalyptus grandis
Eucgr.K03293 1.0kb upstream 1.0kb upstream 1000 false Chr11: 41265846-41266845 Eucalyptus grandis
Eucgr.K03293 1.0kb downstream 1.0kb downstream 3650 true Chr11: 41262196-41265845 Eucalyptus grandis
Eucgr.K03293 1.0kb downstream 1.0kb downstream 1000 false Chr11: 41262196-41263195 Eucalyptus grandis
Eucgr.K03293 2.0kb upstream 2.0kb upstream 4650 true Chr11: 41263196-41267845 Eucalyptus grandis
Eucgr.K03293 2.0kb upstream 2.0kb upstream 2000 false Chr11: 41265846-41267845 Eucalyptus grandis
Eucgr.K03293 2.0kb downstream 2.0kb downstream 4650 true Chr11: 41261196-41265845 Eucalyptus grandis
Eucgr.K03293 2.0kb downstream 2.0kb downstream 2000 false Chr11: 41261196-41263195 Eucalyptus grandis
Eucgr.K03293 5.0kb upstream 5.0kb upstream 7650 true Chr11: 41263196-41270845 Eucalyptus grandis
Eucgr.K03293 5.0kb upstream 5.0kb upstream 5000 false Chr11: 41265846-41270845 Eucalyptus grandis
Eucgr.K03293 5.0kb downstream 5.0kb downstream 7650 true Chr11: 41258196-41265845 Eucalyptus grandis
Eucgr.K03293 5.0kb downstream 5.0kb downstream 5000 false Chr11: 41258196-41263195 Eucalyptus grandis
Eucgr.K03293 10.0kb upstream 10.0kb upstream 12650 true Chr11: 41263196-41275845 Eucalyptus grandis
Eucgr.K03293 10.0kb upstream 10.0kb upstream 10000 false Chr11: 41265846-41275845 Eucalyptus grandis
Eucgr.K03293 10.0kb downstream 10.0kb downstream 12650 true Chr11: 41253196-41265845 Eucalyptus grandis
Eucgr.K03293 10.0kb downstream 10.0kb downstream 10000 false Chr11: 41253196-41263195 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062097 5270 Rosid View MSA
123736718 5271 Pentapetalae View MSA
122790494 5272 Eudicot View MSA
122049389 5273 Angiosperm View MSA
121351644 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.9376 0.0 48.5259    
cufflinks 12.5411 0.0 27.8688    
cufflinks 25.6501 0.0 56.8723   High
cufflinks 14.4942 0.0 32.1079    
cufflinks 8.71401 0.0 19.6804   Low
cufflinks 21.6664 0.0 47.9142    

0 Strain