Gene : Eucgr.K03202 E. grandis v2.0
Defline:  (1 of 1) PTHR10848:SF0 - MEIOTIC RECOMBINATION PROTEIN SPO11 Genomic Order:  2659
Name:  ? Eucgr.K03202 Secondary Identifier:  ? PAC:32068262
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03202 0.5kb upstream 0.5kb upstream 5213 true Chr11: 39968419-39973631 Eucalyptus grandis
Eucgr.K03202 0.5kb upstream 0.5kb upstream 500 false Chr11: 39968419-39968918 Eucalyptus grandis
Eucgr.K03202 0.5kb downstream 0.5kb downstream 5213 true Chr11: 39968919-39974131 Eucalyptus grandis
Eucgr.K03202 0.5kb downstream 0.5kb downstream 500 false Chr11: 39973632-39974131 Eucalyptus grandis
Eucgr.K03202 1.0kb upstream 1.0kb upstream 5713 true Chr11: 39967919-39973631 Eucalyptus grandis
Eucgr.K03202 1.0kb upstream 1.0kb upstream 1000 false Chr11: 39967919-39968918 Eucalyptus grandis
Eucgr.K03202 1.0kb downstream 1.0kb downstream 5713 true Chr11: 39968919-39974631 Eucalyptus grandis
Eucgr.K03202 1.0kb downstream 1.0kb downstream 1000 false Chr11: 39973632-39974631 Eucalyptus grandis
Eucgr.K03202 2.0kb upstream 2.0kb upstream 6713 true Chr11: 39966919-39973631 Eucalyptus grandis
Eucgr.K03202 2.0kb upstream 2.0kb upstream 2000 false Chr11: 39966919-39968918 Eucalyptus grandis
Eucgr.K03202 2.0kb downstream 2.0kb downstream 6713 true Chr11: 39968919-39975631 Eucalyptus grandis
Eucgr.K03202 2.0kb downstream 2.0kb downstream 2000 false Chr11: 39973632-39975631 Eucalyptus grandis
Eucgr.K03202 5.0kb upstream 5.0kb upstream 9713 true Chr11: 39963919-39973631 Eucalyptus grandis
Eucgr.K03202 5.0kb upstream 5.0kb upstream 5000 false Chr11: 39963919-39968918 Eucalyptus grandis
Eucgr.K03202 5.0kb downstream 5.0kb downstream 9713 true Chr11: 39968919-39978631 Eucalyptus grandis
Eucgr.K03202 5.0kb downstream 5.0kb downstream 5000 false Chr11: 39973632-39978631 Eucalyptus grandis
Eucgr.K03202 10.0kb upstream 10.0kb upstream 14713 true Chr11: 39958919-39973631 Eucalyptus grandis
Eucgr.K03202 10.0kb upstream 10.0kb upstream 10000 false Chr11: 39958919-39968918 Eucalyptus grandis
Eucgr.K03202 10.0kb downstream 10.0kb downstream 14713 true Chr11: 39968919-39983631 Eucalyptus grandis
Eucgr.K03202 10.0kb downstream 10.0kb downstream 10000 false Chr11: 39973632-39983631 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068832 5270 Rosid View MSA
123738269 5271 Pentapetalae View MSA
122790268 5272 Eudicot View MSA
122045880 5273 Angiosperm View MSA
121348033 5274 Embryophyte View MSA
123427912 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.78036 0.0 24.5769   High
cufflinks 8.2805 0.0 20.1262    
cufflinks 8.01833 0.0 20.7225    
cufflinks 5.44218 0.0 13.7035    
cufflinks 2.6675 0.0 7.45184   Low
cufflinks 3.66361 0.0 12.1977    

0 Strain