Gene : Eucgr.K03212 E. grandis v2.0
Defline:  (1 of 2) KOG0963 - Transcription factor/CCAAT displacement protein CDP1 Genomic Order:  2669
Name:  ? Eucgr.K03212 Secondary Identifier:  ? PAC:32067760
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03212 0.5kb upstream 0.5kb upstream 6968 true Chr11: 40147271-40154238 Eucalyptus grandis
Eucgr.K03212 0.5kb upstream 0.5kb upstream 500 false Chr11: 40153739-40154238 Eucalyptus grandis
Eucgr.K03212 0.5kb downstream 0.5kb downstream 6968 true Chr11: 40146771-40153738 Eucalyptus grandis
Eucgr.K03212 0.5kb downstream 0.5kb downstream 500 false Chr11: 40146771-40147270 Eucalyptus grandis
Eucgr.K03212 1.0kb upstream 1.0kb upstream 7468 true Chr11: 40147271-40154738 Eucalyptus grandis
Eucgr.K03212 1.0kb upstream 1.0kb upstream 1000 false Chr11: 40153739-40154738 Eucalyptus grandis
Eucgr.K03212 1.0kb downstream 1.0kb downstream 7468 true Chr11: 40146271-40153738 Eucalyptus grandis
Eucgr.K03212 1.0kb downstream 1.0kb downstream 1000 false Chr11: 40146271-40147270 Eucalyptus grandis
Eucgr.K03212 2.0kb upstream 2.0kb upstream 8468 true Chr11: 40147271-40155738 Eucalyptus grandis
Eucgr.K03212 2.0kb upstream 2.0kb upstream 2000 false Chr11: 40153739-40155738 Eucalyptus grandis
Eucgr.K03212 2.0kb downstream 2.0kb downstream 8468 true Chr11: 40145271-40153738 Eucalyptus grandis
Eucgr.K03212 2.0kb downstream 2.0kb downstream 2000 false Chr11: 40145271-40147270 Eucalyptus grandis
Eucgr.K03212 5.0kb upstream 5.0kb upstream 11468 true Chr11: 40147271-40158738 Eucalyptus grandis
Eucgr.K03212 5.0kb upstream 5.0kb upstream 5000 false Chr11: 40153739-40158738 Eucalyptus grandis
Eucgr.K03212 5.0kb downstream 5.0kb downstream 11468 true Chr11: 40142271-40153738 Eucalyptus grandis
Eucgr.K03212 5.0kb downstream 5.0kb downstream 5000 false Chr11: 40142271-40147270 Eucalyptus grandis
Eucgr.K03212 10.0kb upstream 10.0kb upstream 16468 true Chr11: 40147271-40163738 Eucalyptus grandis
Eucgr.K03212 10.0kb upstream 10.0kb upstream 10000 false Chr11: 40153739-40163738 Eucalyptus grandis
Eucgr.K03212 10.0kb downstream 10.0kb downstream 16468 true Chr11: 40137271-40153738 Eucalyptus grandis
Eucgr.K03212 10.0kb downstream 10.0kb downstream 10000 false Chr11: 40137271-40147270 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067552 5270 Rosid View MSA
123746555 5271 Pentapetalae View MSA
122793282 5272 Eudicot View MSA
122043057 5273 Angiosperm View MSA
121310071 5274 Embryophyte View MSA
123347664 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.9814 0.0 12.2026    
cufflinks 33.8123 0.0 100.518   High
cufflinks 3.32211 0.0 9.30178   Low
cufflinks 16.2851 0.0 43.2583    
cufflinks 6.66604 0.0 17.5162    
cufflinks 8.44884 0.0 20.9502    

0 Strain