Gene : Eucgr.K03183 E. grandis v2.0
Defline:  (1 of 2) PTHR30028 - UPF0014 INNER MEMBRANE PROTEIN YBBM-RELATED Genomic Order:  2643
Name:  ? Eucgr.K03183 Secondary Identifier:  ? PAC:32065986
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03183 0.5kb upstream 0.5kb upstream 2901 true Chr11: 39835605-39838505 Eucalyptus grandis
Eucgr.K03183 0.5kb upstream 0.5kb upstream 500 false Chr11: 39838006-39838505 Eucalyptus grandis
Eucgr.K03183 0.5kb downstream 0.5kb downstream 2901 true Chr11: 39835105-39838005 Eucalyptus grandis
Eucgr.K03183 0.5kb downstream 0.5kb downstream 500 false Chr11: 39835105-39835604 Eucalyptus grandis
Eucgr.K03183 1.0kb upstream 1.0kb upstream 3401 true Chr11: 39835605-39839005 Eucalyptus grandis
Eucgr.K03183 1.0kb upstream 1.0kb upstream 1000 false Chr11: 39838006-39839005 Eucalyptus grandis
Eucgr.K03183 1.0kb downstream 1.0kb downstream 3401 true Chr11: 39834605-39838005 Eucalyptus grandis
Eucgr.K03183 1.0kb downstream 1.0kb downstream 1000 false Chr11: 39834605-39835604 Eucalyptus grandis
Eucgr.K03183 2.0kb upstream 2.0kb upstream 4401 true Chr11: 39835605-39840005 Eucalyptus grandis
Eucgr.K03183 2.0kb upstream 2.0kb upstream 2000 false Chr11: 39838006-39840005 Eucalyptus grandis
Eucgr.K03183 2.0kb downstream 2.0kb downstream 4401 true Chr11: 39833605-39838005 Eucalyptus grandis
Eucgr.K03183 2.0kb downstream 2.0kb downstream 2000 false Chr11: 39833605-39835604 Eucalyptus grandis
Eucgr.K03183 5.0kb upstream 5.0kb upstream 7401 true Chr11: 39835605-39843005 Eucalyptus grandis
Eucgr.K03183 5.0kb upstream 5.0kb upstream 5000 false Chr11: 39838006-39843005 Eucalyptus grandis
Eucgr.K03183 5.0kb downstream 5.0kb downstream 7401 true Chr11: 39830605-39838005 Eucalyptus grandis
Eucgr.K03183 5.0kb downstream 5.0kb downstream 5000 false Chr11: 39830605-39835604 Eucalyptus grandis
Eucgr.K03183 10.0kb upstream 10.0kb upstream 12401 true Chr11: 39835605-39848005 Eucalyptus grandis
Eucgr.K03183 10.0kb upstream 10.0kb upstream 10000 false Chr11: 39838006-39848005 Eucalyptus grandis
Eucgr.K03183 10.0kb downstream 10.0kb downstream 12401 true Chr11: 39825605-39838005 Eucalyptus grandis
Eucgr.K03183 10.0kb downstream 10.0kb downstream 10000 false Chr11: 39825605-39835604 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064060 5270 Rosid View MSA
123739826 5271 Pentapetalae View MSA
122792432 5272 Eudicot View MSA
122042449 5273 Angiosperm View MSA
121345105 5274 Embryophyte View MSA
123424866 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.41927 0.0 11.3303    
cufflinks 3.18094 0.0 8.40524    
cufflinks 1.81488 0.0 5.10423    
cufflinks 8.2785 0.0 19.9872    
cufflinks 11.7347 0.0 27.3386   High
cufflinks 1.10951 0.0 3.28035   Low

0 Strain