Gene : Eucgr.K03190 E. grandis v2.0
Defline:  (1 of 5) PTHR12381 - RIBONUCLEOPROTEIN Genomic Order:  2648
Name:  ? Eucgr.K03190 Secondary Identifier:  ? PAC:32065948
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03190 0.5kb upstream 0.5kb upstream 2618 true Chr11: 39897535-39900152 Eucalyptus grandis
Eucgr.K03190 0.5kb upstream 0.5kb upstream 500 false Chr11: 39899653-39900152 Eucalyptus grandis
Eucgr.K03190 0.5kb downstream 0.5kb downstream 2618 true Chr11: 39897035-39899652 Eucalyptus grandis
Eucgr.K03190 0.5kb downstream 0.5kb downstream 500 false Chr11: 39897035-39897534 Eucalyptus grandis
Eucgr.K03190 1.0kb upstream 1.0kb upstream 3118 true Chr11: 39897535-39900652 Eucalyptus grandis
Eucgr.K03190 1.0kb upstream 1.0kb upstream 1000 false Chr11: 39899653-39900652 Eucalyptus grandis
Eucgr.K03190 1.0kb downstream 1.0kb downstream 3118 true Chr11: 39896535-39899652 Eucalyptus grandis
Eucgr.K03190 1.0kb downstream 1.0kb downstream 1000 false Chr11: 39896535-39897534 Eucalyptus grandis
Eucgr.K03190 2.0kb upstream 2.0kb upstream 4118 true Chr11: 39897535-39901652 Eucalyptus grandis
Eucgr.K03190 2.0kb upstream 2.0kb upstream 2000 false Chr11: 39899653-39901652 Eucalyptus grandis
Eucgr.K03190 2.0kb downstream 2.0kb downstream 4118 true Chr11: 39895535-39899652 Eucalyptus grandis
Eucgr.K03190 2.0kb downstream 2.0kb downstream 2000 false Chr11: 39895535-39897534 Eucalyptus grandis
Eucgr.K03190 5.0kb upstream 5.0kb upstream 7118 true Chr11: 39897535-39904652 Eucalyptus grandis
Eucgr.K03190 5.0kb upstream 5.0kb upstream 5000 false Chr11: 39899653-39904652 Eucalyptus grandis
Eucgr.K03190 5.0kb downstream 5.0kb downstream 7118 true Chr11: 39892535-39899652 Eucalyptus grandis
Eucgr.K03190 5.0kb downstream 5.0kb downstream 5000 false Chr11: 39892535-39897534 Eucalyptus grandis
Eucgr.K03190 10.0kb upstream 10.0kb upstream 12118 true Chr11: 39897535-39909652 Eucalyptus grandis
Eucgr.K03190 10.0kb upstream 10.0kb upstream 10000 false Chr11: 39899653-39909652 Eucalyptus grandis
Eucgr.K03190 10.0kb downstream 10.0kb downstream 12118 true Chr11: 39887535-39899652 Eucalyptus grandis
Eucgr.K03190 10.0kb downstream 10.0kb downstream 10000 false Chr11: 39887535-39897534 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060926 5270 Rosid View MSA
123742153 5271 Pentapetalae View MSA
122787533 5272 Eudicot View MSA
122051388 5273 Angiosperm View MSA
121344836 5274 Embryophyte View MSA
123428142 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.98575 0.0 17.8397    
cufflinks 1.78367 0.0 5.27835   Low
cufflinks 7.28939 0.0 18.6507    
cufflinks 6.94248 0.0 17.9029    
cufflinks 1.21739 0.0 3.76545   Low
cufflinks 8.55625 0.0 21.2657    

0 Strain