Gene : Eucgr.L02893 E. grandis v2.0
Defline:  (1 of 5) PTHR10353:SF27 - BETA-GLUCOSIDASE 45-RELATED Genomic Order:  1
Name:  ? Eucgr.L02893 Secondary Identifier:  ? PAC:32040386
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5176 Eucalyptus grandis pathologic  
Egrandis PWY-7089 Eucalyptus grandis pathologic  
Egrandis PWY-7091 Eucalyptus grandis pathologic  
Egrandis PWY-7092 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02893 0.5kb upstream 0.5kb upstream 1825 true scaffold_1568: 794-2618 Eucalyptus grandis
Eucgr.L02893 0.5kb upstream 0.5kb upstream 500 false scaffold_1568: 2119-2618 Eucalyptus grandis
Eucgr.L02893 0.5kb downstream 0.5kb downstream 1825 true scaffold_1568: 294-2118 Eucalyptus grandis
Eucgr.L02893 0.5kb downstream 0.5kb downstream 500 false scaffold_1568: 294-793 Eucalyptus grandis
Eucgr.L02893 1.0kb upstream 1.0kb upstream 2325 true scaffold_1568: 794-3118 Eucalyptus grandis
Eucgr.L02893 1.0kb upstream 1.0kb upstream 1000 false scaffold_1568: 2119-3118 Eucalyptus grandis
Eucgr.L02893 1.0kb downstream 1.0kb downstream 2118 true scaffold_1568: 1-2118 Eucalyptus grandis
Eucgr.L02893 1.0kb downstream 1.0kb downstream 793 false scaffold_1568: 1-793 Eucalyptus grandis
Eucgr.L02893 2.0kb upstream 2.0kb upstream 3325 true scaffold_1568: 794-4118 Eucalyptus grandis
Eucgr.L02893 2.0kb upstream 2.0kb upstream 2000 false scaffold_1568: 2119-4118 Eucalyptus grandis
Eucgr.L02893 2.0kb downstream 2.0kb downstream 2118 true scaffold_1568: 1-2118 Eucalyptus grandis
Eucgr.L02893 2.0kb downstream 2.0kb downstream 793 false scaffold_1568: 1-793 Eucalyptus grandis
Eucgr.L02893 5.0kb upstream 5.0kb upstream 6325 true scaffold_1568: 794-7118 Eucalyptus grandis
Eucgr.L02893 5.0kb upstream 5.0kb upstream 5000 false scaffold_1568: 2119-7118 Eucalyptus grandis
Eucgr.L02893 5.0kb downstream 5.0kb downstream 2118 true scaffold_1568: 1-2118 Eucalyptus grandis
Eucgr.L02893 5.0kb downstream 5.0kb downstream 793 false scaffold_1568: 1-793 Eucalyptus grandis
Eucgr.L02893 10.0kb upstream 10.0kb upstream 8928 true scaffold_1568: 794-9721 Eucalyptus grandis
Eucgr.L02893 10.0kb upstream 10.0kb upstream 7603 false scaffold_1568: 2119-9721 Eucalyptus grandis
Eucgr.L02893 10.0kb downstream 10.0kb downstream 2118 true scaffold_1568: 1-2118 Eucalyptus grandis
Eucgr.L02893 10.0kb downstream 10.0kb downstream 793 false scaffold_1568: 1-793 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074586 5270 Rosid View MSA
123753517 5271 Pentapetalae View MSA
122797747 5272 Eudicot View MSA
122051599 5273 Angiosperm View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.588851 0.0 2.20187    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.282181 0.0 1.27781 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain