Gene : Eucgr.L02896 E. grandis v2.0
Defline:  (1 of 1) PF06745 - KaiC (KaiC) Genomic Order:  1
Name:  ? Eucgr.L02896 Secondary Identifier:  ? PAC:32027872
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02896 0.5kb upstream 0.5kb upstream 1940 true scaffold_1570: 2947-4886 Eucalyptus grandis
Eucgr.L02896 0.5kb upstream 0.5kb upstream 500 false scaffold_1570: 2947-3446 Eucalyptus grandis
Eucgr.L02896 0.5kb downstream 0.5kb downstream 1940 true scaffold_1570: 3447-5386 Eucalyptus grandis
Eucgr.L02896 0.5kb downstream 0.5kb downstream 500 false scaffold_1570: 4887-5386 Eucalyptus grandis
Eucgr.L02896 1.0kb upstream 1.0kb upstream 2440 true scaffold_1570: 2447-4886 Eucalyptus grandis
Eucgr.L02896 1.0kb upstream 1.0kb upstream 1000 false scaffold_1570: 2447-3446 Eucalyptus grandis
Eucgr.L02896 1.0kb downstream 1.0kb downstream 2440 true scaffold_1570: 3447-5886 Eucalyptus grandis
Eucgr.L02896 1.0kb downstream 1.0kb downstream 1000 false scaffold_1570: 4887-5886 Eucalyptus grandis
Eucgr.L02896 2.0kb upstream 2.0kb upstream 3440 true scaffold_1570: 1447-4886 Eucalyptus grandis
Eucgr.L02896 2.0kb upstream 2.0kb upstream 2000 false scaffold_1570: 1447-3446 Eucalyptus grandis
Eucgr.L02896 2.0kb downstream 2.0kb downstream 3440 true scaffold_1570: 3447-6886 Eucalyptus grandis
Eucgr.L02896 2.0kb downstream 2.0kb downstream 2000 false scaffold_1570: 4887-6886 Eucalyptus grandis
Eucgr.L02896 5.0kb upstream 5.0kb upstream 4886 true scaffold_1570: 1-4886 Eucalyptus grandis
Eucgr.L02896 5.0kb upstream 5.0kb upstream 3446 false scaffold_1570: 1-3446 Eucalyptus grandis
Eucgr.L02896 5.0kb downstream 5.0kb downstream 6440 true scaffold_1570: 3447-9886 Eucalyptus grandis
Eucgr.L02896 5.0kb downstream 5.0kb downstream 5000 false scaffold_1570: 4887-9886 Eucalyptus grandis
Eucgr.L02896 10.0kb upstream 10.0kb upstream 4886 true scaffold_1570: 1-4886 Eucalyptus grandis
Eucgr.L02896 10.0kb upstream 10.0kb upstream 3446 false scaffold_1570: 1-3446 Eucalyptus grandis
Eucgr.L02896 10.0kb downstream 10.0kb downstream 6901 true scaffold_1570: 3447-10347 Eucalyptus grandis
Eucgr.L02896 10.0kb downstream 10.0kb downstream 5461 false scaffold_1570: 4887-10347 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027907 5273 Angiosperm View MSA
124051018 5270 Rosid View MSA
123619970 5271 Pentapetalae View MSA
122654392 5272 Eudicot View MSA
121351318 5274 Embryophyte View MSA
123382118 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.34589 0.0 12.7545    
cufflinks 9.83607 0.0 26.1435   High
cufflinks 4.34962 0.0 12.7537    
cufflinks 3.52305 0.0 10.5174   Low
cufflinks 9.131 0.0 24.6865   High
cufflinks 6.5867 0.0 18.6388    

0 Strain