Gene : Eucgr.L02880 E. grandis v2.0
Defline:  (1 of 3) PTHR11010//PTHR11010:SF48 - PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED Genomic Order:  1
Name:  ? Eucgr.L02880 Secondary Identifier:  ? PAC:32027984
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02880 0.5kb upstream 0.5kb upstream 4366 true scaffold_1545: 1-4366 Eucalyptus grandis
Eucgr.L02880 0.5kb upstream 0.5kb upstream 75 false scaffold_1545: 1-75 Eucalyptus grandis
Eucgr.L02880 0.5kb downstream 0.5kb downstream 4791 true scaffold_1545: 76-4866 Eucalyptus grandis
Eucgr.L02880 0.5kb downstream 0.5kb downstream 500 false scaffold_1545: 4367-4866 Eucalyptus grandis
Eucgr.L02880 1.0kb upstream 1.0kb upstream 4366 true scaffold_1545: 1-4366 Eucalyptus grandis
Eucgr.L02880 1.0kb upstream 1.0kb upstream 75 false scaffold_1545: 1-75 Eucalyptus grandis
Eucgr.L02880 1.0kb downstream 1.0kb downstream 5291 true scaffold_1545: 76-5366 Eucalyptus grandis
Eucgr.L02880 1.0kb downstream 1.0kb downstream 1000 false scaffold_1545: 4367-5366 Eucalyptus grandis
Eucgr.L02880 2.0kb upstream 2.0kb upstream 4366 true scaffold_1545: 1-4366 Eucalyptus grandis
Eucgr.L02880 2.0kb upstream 2.0kb upstream 75 false scaffold_1545: 1-75 Eucalyptus grandis
Eucgr.L02880 2.0kb downstream 2.0kb downstream 6291 true scaffold_1545: 76-6366 Eucalyptus grandis
Eucgr.L02880 2.0kb downstream 2.0kb downstream 2000 false scaffold_1545: 4367-6366 Eucalyptus grandis
Eucgr.L02880 5.0kb upstream 5.0kb upstream 4366 true scaffold_1545: 1-4366 Eucalyptus grandis
Eucgr.L02880 5.0kb upstream 5.0kb upstream 75 false scaffold_1545: 1-75 Eucalyptus grandis
Eucgr.L02880 5.0kb downstream 5.0kb downstream 9291 true scaffold_1545: 76-9366 Eucalyptus grandis
Eucgr.L02880 5.0kb downstream 5.0kb downstream 5000 false scaffold_1545: 4367-9366 Eucalyptus grandis
Eucgr.L02880 10.0kb upstream 10.0kb upstream 4366 true scaffold_1545: 1-4366 Eucalyptus grandis
Eucgr.L02880 10.0kb upstream 10.0kb upstream 75 false scaffold_1545: 1-75 Eucalyptus grandis
Eucgr.L02880 10.0kb downstream 10.0kb downstream 9719 true scaffold_1545: 76-9794 Eucalyptus grandis
Eucgr.L02880 10.0kb downstream 10.0kb downstream 5428 false scaffold_1545: 4367-9794 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124052198 5270 Rosid View MSA
123753394 5271 Pentapetalae View MSA
122793921 5272 Eudicot View MSA
122049838 5273 Angiosperm View MSA
121344690 5274 Embryophyte View MSA
123428837 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain